Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710389

Identifier: 218710389

GI number: 218710389

Start: 2595597

End: 2596787

Strand: Reverse

Name: 218710389

Synonym: VS_2426

Alternate gene names: NA

Gene position: 2596787-2595597 (Counterclockwise)

Preceding gene: 218710391

Following gene: 218710388

Centisome position: 78.71

GC content: 47.1

Gene sequence:

>1191_bases
ATGAGTTTGTTAAATATCACAGATAAAAGCGTAGAAGATGCGATTCCAGCTTATCTTCGTTTAGGTTTTAGACCTTTCTT
CTTTCTTGGCAGTCTCTATGCCGTGATTGCTATCGTCGCTTGGGTTGTCATGTTCCAAAATGGTCAGCCTGAAGTGTTAA
AAGTACCCGCGCTTTGGTGGCACGTACATGAAATGCTGTTTGGTTTTTCTATGGCGATTGTGGTTGGTTTTGTTCTGACT
GCGGTGCAAACGTGGACGGGAGTCAACGGAACTAAACATTATCGATTAGCAGCGCTCGTTGGTTTGTGGCTCGCACCTCG
TATTCTATTTTGGACACCGGCGCCATTGTGGTTAATCTCATCGGTTGAAGCGTTGTTCTTGATCTTTGCTGCTTACGAGA
TTGGTTTCCGTGTCGTGAAATCGAAAGGCTGGAAGAACCTGTTTTTTGTGCCGCTGTTTATATTGGCTATCGTCGCTAAC
TTTGCTAGTTACGCGACGATTAAAGGCATGCCTCCATTCCCATCGTCTGCAGTATGGCACGCAATGTTATGGTGGTTTAC
CTTGCTATTATCCGTGATGGGTGGACGAGTTATCCCGTTCTTCACGGCCCGTCGTTTTGACTTTGAAAAAGCGCAACCAC
TGGTTTGGTTGGAATGGCTAGCGAACCTGCCTTTGGTTGGATTGTTTGTGCTGAGCTTCTTCCCGTTGACCTTTGCTCAA
GTGGGCAATGAGTTGATGGTGTTTGCAGGTGTGACTCAGTTGGTGCGCTTTGTTCGTTGGAAGCCTTGGACAACGTTGTC
TGAGCCTTTGGTGTGGTCACTGCATGCGGCTTATCTGTGTATTCCTTTGAGCTTGTTGCTAAGAGGCTTGTTAGATAATC
CATTTGCAAGCCATAACATGCTGCACCTGTTTGCGATTGGCGGTTTGAGTGGGCTCATTCTTGCGATGATCACACGTGTC
ACCATGGGACACACAGGCCGTGCTATCTATAAAGGGCCAAGTATGGCACTGGCGTTCTCGGCTATCTTTATCGCGGCATT
AGTTCGTAGCTTAGGTGTCACTTTCTTCCCTGCTTACTTATTTGAGATGGTCAACATCAGCGCGGGTTTATGGACGTTGG
CGTTTGGTCTGTTTATCTGGAAGTTTGGCATGATGCTGTTAACACCAAGAGTGGATGGTCATCCGGGGTAA

Upstream 100 bases:

>100_bases
TGTGTTAGGCAATATTGCGGTGATGATTACTGCACCTTGAATTTGGCTATTGGTAGCAATTCAATATAAGCCACACTTGG
CTTGTAATCTGAAATGAGGA

Downstream 100 bases:

>100_bases
GCGTATTGATTTTCTAACACATTTTTAAAGGGAAGCAATGAGCTTCTCTTTTTGATCGCAGCTAGTTATCGCTTTAATTT
ATCTCTGTTTGAGAACCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Heme-Cu Protein NnrS; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; ATP Synthase F0 A Subunit; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSLLNITDKSVEDAIPAYLRLGFRPFFFLGSLYAVIAIVAWVVMFQNGQPEVLKVPALWWHVHEMLFGFSMAIVVGFVLT
AVQTWTGVNGTKHYRLAALVGLWLAPRILFWTPAPLWLISSVEALFLIFAAYEIGFRVVKSKGWKNLFFVPLFILAIVAN
FASYATIKGMPPFPSSAVWHAMLWWFTLLLSVMGGRVIPFFTARRFDFEKAQPLVWLEWLANLPLVGLFVLSFFPLTFAQ
VGNELMVFAGVTQLVRFVRWKPWTTLSEPLVWSLHAAYLCIPLSLLLRGLLDNPFASHNMLHLFAIGGLSGLILAMITRV
TMGHTGRAIYKGPSMALAFSAIFIAALVRSLGVTFFPAYLFEMVNISAGLWTLAFGLFIWKFGMMLLTPRVDGHPG

Sequences:

>Translated_396_residues
MSLLNITDKSVEDAIPAYLRLGFRPFFFLGSLYAVIAIVAWVVMFQNGQPEVLKVPALWWHVHEMLFGFSMAIVVGFVLT
AVQTWTGVNGTKHYRLAALVGLWLAPRILFWTPAPLWLISSVEALFLIFAAYEIGFRVVKSKGWKNLFFVPLFILAIVAN
FASYATIKGMPPFPSSAVWHAMLWWFTLLLSVMGGRVIPFFTARRFDFEKAQPLVWLEWLANLPLVGLFVLSFFPLTFAQ
VGNELMVFAGVTQLVRFVRWKPWTTLSEPLVWSLHAAYLCIPLSLLLRGLLDNPFASHNMLHLFAIGGLSGLILAMITRV
TMGHTGRAIYKGPSMALAFSAIFIAALVRSLGVTFFPAYLFEMVNISAGLWTLAFGLFIWKFGMMLLTPRVDGHPG
>Mature_395_residues
SLLNITDKSVEDAIPAYLRLGFRPFFFLGSLYAVIAIVAWVVMFQNGQPEVLKVPALWWHVHEMLFGFSMAIVVGFVLTA
VQTWTGVNGTKHYRLAALVGLWLAPRILFWTPAPLWLISSVEALFLIFAAYEIGFRVVKSKGWKNLFFVPLFILAIVANF
ASYATIKGMPPFPSSAVWHAMLWWFTLLLSVMGGRVIPFFTARRFDFEKAQPLVWLEWLANLPLVGLFVLSFFPLTFAQV
GNELMVFAGVTQLVRFVRWKPWTTLSEPLVWSLHAAYLCIPLSLLLRGLLDNPFASHNMLHLFAIGGLSGLILAMITRVT
MGHTGRAIYKGPSMALAFSAIFIAALVRSLGVTFFPAYLFEMVNISAGLWTLAFGLFIWKFGMMLLTPRVDGHPG

Specific function: Unknown

COG id: COG3213

COG function: function code P; Uncharacterized protein involved in response to NO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44432; Mature: 44301

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLLNITDKSVEDAIPAYLRLGFRPFFFLGSLYAVIAIVAWVVMFQNGQPEVLKVPALWW
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
HVHEMLFGFSMAIVVGFVLTAVQTWTGVNGTKHYRLAALVGLWLAPRILFWTPAPLWLIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SVEALFLIFAAYEIGFRVVKSKGWKNLFFVPLFILAIVANFASYATIKGMPPFPSSAVWH
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
AMLWWFTLLLSVMGGRVIPFFTARRFDFEKAQPLVWLEWLANLPLVGLFVLSFFPLTFAQ
HHHHHHHHHHHHHCCCEEHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VGNELMVFAGVTQLVRFVRWKPWTTLSEPLVWSLHAAYLCIPLSLLLRGLLDNPFASHNM
HCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LHLFAIGGLSGLILAMITRVTMGHTGRAIYKGPSMALAFSAIFIAALVRSLGVTFFPAYL
EEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
FEMVNISAGLWTLAFGLFIWKFGMMLLTPRVDGHPG
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA