Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is bhuA [H]
Identifier: 218710359
GI number: 218710359
Start: 2564305
End: 2566335
Strand: Reverse
Name: bhuA [H]
Synonym: VS_2395
Alternate gene names: 218710359
Gene position: 2566335-2564305 (Counterclockwise)
Preceding gene: 218710360
Following gene: 218710353
Centisome position: 77.78
GC content: 44.36
Gene sequence:
>2031_bases ATGAAACTTAAAGCACTATCAGTAGCCGTTACGGTTGCCTTAACCTCATTTACAGCATTTGCTGCCGACGAACCAGAAAC CGTAGTCGTTATCGGTTCTGCCCTTGACCAATTGATTCAGACTGAAATCAACTCTGACACACTGGAAAAGAAGCAAGCAT CAGACATCAAAGATGTTTTGAATACTATGCCTAGCGTTACGGTTGACGGGAACGCACGTTACTCTCGCAAAGTATTTGTA CGTGGTATGGAAGACAAATTTGCCGTAGTGACTATCGATGGTGCGCGACAAGAAGGTCAGCTTTTCCACCACTCTGGTGA CCAAGCGATTGATCCTGCAATGCTAAAAAGAGCTGAAATTGAATTAGGTGGTAACTCTGCACTGTCAGGTTCTGGTGCTA TCAATGGTTCATTTAGCTACGAAACGAAAGACCCAAGCGATCTTCTTAAGCCGGGTGAAAGCGTTGGTGCTCGAGTAAAA ACAAGCTATCAAACAGCTTATGAGCGTTTTGCAACCAACGTTGCTGTGTATGCAAAAGTGAACGACAAGCTACAGTTCAT GGGTATTGCGAACTATTCAGAAGATGGCGATCTGCACATTCCTGATCAAGAAGCGGTAACCTCTAAGCAGGGTGAGCTTA AGTCGGGTTTGGCTAAAGTTGTTTTCATTCCTAATGATGCCAATGAATTTAAACTGACTTTCAACCGATACAGTGATGGT GGTACGCGTCAGCTTTCTGGCGAAAAGGCGGGTGCTCTGTATGCTGACGATAAACACGACTATCATTCGCTTAATCGCGA TACAGTGACGCTACAGCACGAATACGATGCAGGTAGTGATCTAGTTCATCTGAAAAGTAATGTTTACTACAACCGTCAAT ACATGGATCGTGATGCTCTTGAAGGTACCGCTTGGGGCAAAACACCGGCAGGTAAATGGTTCAAAGATGGCAAAATGTCT TACCCTAAGCGTGAATACAATGTAACAACCATTGGCGGCGACATTCGTAACGTTTCTTGGGTTGGTGAGCATGAGCTTAC TTATGGTCTTGAGGGCTACAAGGCCAAGCAATGGATTGATGCTGGTCAAGGTGTATATCTAAGCGGTACTAAGCAAGGTC AAACCGAGAACTACAGCATGGATGGTGGTACGGTGACGGCTTATGGTCTGTATCTGCAAGATATGTACGAGTTCAGCGAC TTCCGTTTAACAACGGGCCTTCGTTACGACGTTCATAAACTGGGTGGTGTGTATAAGGGCGAGTTTGACCAACTATCTCC AAAGTTCAAAGGTGAATACCAAACAACGGAAAATCTAAAACTTCGTGTGGGTTACGGTCGTCTGTTTAAAGGCGCGTCAC TGCCGGAAACGCTAACGATGAAAGCACCAAGCAAAGTTAAGCAGTCTGATACGAAGGCGATGACGGGTAATAACTATGAA GCGGGCTTTGATTATGAGCTAACACGTTTGCTTGCGGCTGATTACGCGATTCTAGGTTTCACGGCTTATACCTACGACCT TGATAACCAAATGCACCCAACTAAGAACAACGCAACATTATCTAATAAGTATGATGTTGAAGTTTGGGGGGTAGAGACTG TATTGAGCTATCAGTTAGATGCTTTAAGTGTTTACGCTAACCACTCTTACTCAGATGGTGAGCAAAAGAGCCTGAAAAAC GGCAAGACAAGTCACATGAATAAAACCGGTATTCATAACTTTAAGGCCGGTTTTAACTACAGCCTAAACAATGAATTTGT GTTTGGTTGGGATTCACGCTTTGTTCCGGGGAACGATTACGAGAACGAAAAAGGCAAAGAGATCAAACGCTCAGGCTTCG CAACGCACAACATTTGGGCGGCTTACACACCGACGTTTGCTAAAGACCTAGAGATGAACCTTGGTATCGATAACCTGCTT GATAAGAAGTACGCTGAGCATACTGGTTTTGGTATCTCTTGGGGTTCAGAAAAGTACACCAGCTATGAAGCGGGTCGTAA CTTTAAAGCTTCTATCGCTTATAGCTTCTAA
Upstream 100 bases:
>100_bases AGTAAAGAATGTAAATGATAACCATTACTATTAACATTGTTATTAGTGTCGTGTACCATTCGTGCACTTTCACTTAAATC TATAAAATATAAGTCGCATT
Downstream 100 bases:
>100_bases TCTGCTCTTAGCTGAAAGTTATTCTAGAAATAGAGAGTTATCAGTATAAGTGCAATGTTTCGTCTTAAAATGAAACAACA AAAAAGCCTTAGTTCAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: Brucella heme uptake protein A [H]
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MKLKALSVAVTVALTSFTAFAADEPETVVVIGSALDQLIQTEINSDTLEKKQASDIKDVLNTMPSVTVDGNARYSRKVFV RGMEDKFAVVTIDGARQEGQLFHHSGDQAIDPAMLKRAEIELGGNSALSGSGAINGSFSYETKDPSDLLKPGESVGARVK TSYQTAYERFATNVAVYAKVNDKLQFMGIANYSEDGDLHIPDQEAVTSKQGELKSGLAKVVFIPNDANEFKLTFNRYSDG GTRQLSGEKAGALYADDKHDYHSLNRDTVTLQHEYDAGSDLVHLKSNVYYNRQYMDRDALEGTAWGKTPAGKWFKDGKMS YPKREYNVTTIGGDIRNVSWVGEHELTYGLEGYKAKQWIDAGQGVYLSGTKQGQTENYSMDGGTVTAYGLYLQDMYEFSD FRLTTGLRYDVHKLGGVYKGEFDQLSPKFKGEYQTTENLKLRVGYGRLFKGASLPETLTMKAPSKVKQSDTKAMTGNNYE AGFDYELTRLLAADYAILGFTAYTYDLDNQMHPTKNNATLSNKYDVEVWGVETVLSYQLDALSVYANHSYSDGEQKSLKN GKTSHMNKTGIHNFKAGFNYSLNNEFVFGWDSRFVPGNDYENEKGKEIKRSGFATHNIWAAYTPTFAKDLEMNLGIDNLL DKKYAEHTGFGISWGSEKYTSYEAGRNFKASIAYSF
Sequences:
>Translated_676_residues MKLKALSVAVTVALTSFTAFAADEPETVVVIGSALDQLIQTEINSDTLEKKQASDIKDVLNTMPSVTVDGNARYSRKVFV RGMEDKFAVVTIDGARQEGQLFHHSGDQAIDPAMLKRAEIELGGNSALSGSGAINGSFSYETKDPSDLLKPGESVGARVK TSYQTAYERFATNVAVYAKVNDKLQFMGIANYSEDGDLHIPDQEAVTSKQGELKSGLAKVVFIPNDANEFKLTFNRYSDG GTRQLSGEKAGALYADDKHDYHSLNRDTVTLQHEYDAGSDLVHLKSNVYYNRQYMDRDALEGTAWGKTPAGKWFKDGKMS YPKREYNVTTIGGDIRNVSWVGEHELTYGLEGYKAKQWIDAGQGVYLSGTKQGQTENYSMDGGTVTAYGLYLQDMYEFSD FRLTTGLRYDVHKLGGVYKGEFDQLSPKFKGEYQTTENLKLRVGYGRLFKGASLPETLTMKAPSKVKQSDTKAMTGNNYE AGFDYELTRLLAADYAILGFTAYTYDLDNQMHPTKNNATLSNKYDVEVWGVETVLSYQLDALSVYANHSYSDGEQKSLKN GKTSHMNKTGIHNFKAGFNYSLNNEFVFGWDSRFVPGNDYENEKGKEIKRSGFATHNIWAAYTPTFAKDLEMNLGIDNLL DKKYAEHTGFGISWGSEKYTSYEAGRNFKASIAYSF >Mature_676_residues MKLKALSVAVTVALTSFTAFAADEPETVVVIGSALDQLIQTEINSDTLEKKQASDIKDVLNTMPSVTVDGNARYSRKVFV RGMEDKFAVVTIDGARQEGQLFHHSGDQAIDPAMLKRAEIELGGNSALSGSGAINGSFSYETKDPSDLLKPGESVGARVK TSYQTAYERFATNVAVYAKVNDKLQFMGIANYSEDGDLHIPDQEAVTSKQGELKSGLAKVVFIPNDANEFKLTFNRYSDG GTRQLSGEKAGALYADDKHDYHSLNRDTVTLQHEYDAGSDLVHLKSNVYYNRQYMDRDALEGTAWGKTPAGKWFKDGKMS YPKREYNVTTIGGDIRNVSWVGEHELTYGLEGYKAKQWIDAGQGVYLSGTKQGQTENYSMDGGTVTAYGLYLQDMYEFSD FRLTTGLRYDVHKLGGVYKGEFDQLSPKFKGEYQTTENLKLRVGYGRLFKGASLPETLTMKAPSKVKQSDTKAMTGNNYE AGFDYELTRLLAADYAILGFTAYTYDLDNQMHPTKNNATLSNKYDVEVWGVETVLSYQLDALSVYANHSYSDGEQKSLKN GKTSHMNKTGIHNFKAGFNYSLNNEFVFGWDSRFVPGNDYENEKGKEIKRSGFATHNIWAAYTPTFAKDLEMNLGIDNLL DKKYAEHTGFGISWGSEKYTSYEAGRNFKASIAYSF
Specific function: Heme transporter playing an important role in stationary-phase iron acquisition and required for maintenance of chronic infection in mice [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 75198; Mature: 75198
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKALSVAVTVALTSFTAFAADEPETVVVIGSALDQLIQTEINSDTLEKKQASDIKDVL CCEEEEEEEEEEEEHHHEEECCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NTMPSVTVDGNARYSRKVFVRGMEDKFAVVTIDGARQEGQLFHHSGDQAIDPAMLKRAEI HHCCCEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHEEEEE ELGGNSALSGSGAINGSFSYETKDPSDLLKPGESVGARVKTSYQTAYERFATNVAVYAKV EECCCCCCCCCCCCCCEEEECCCCHHHHHCCCHHHCCEEEHHHHHHHHHHHCCEEEEEEE NDKLQFMGIANYSEDGDLHIPDQEAVTSKQGELKSGLAKVVFIPNDANEFKLTFNRYSDG CCCEEEEEEECCCCCCCEECCCHHHHHCCCCHHHCCCEEEEEECCCCCEEEEEEEEECCC GTRQLSGEKAGALYADDKHDYHSLNRDTVTLQHEYDAGSDLVHLKSNVYYNRQYMDRDAL CCEEECCCCCCEEEECCCCHHHCCCCCEEEEEECCCCCCCEEEEECCEEECHHHCCCHHC EGTAWGKTPAGKWFKDGKMSYPKREYNVTTIGGDIRNVSWVGEHELTYGLEGYKAKQWID CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEECCCCCCHHHHHC AGQGVYLSGTKQGQTENYSMDGGTVTAYGLYLQDMYEFSDFRLTTGLRYDVHKLGGVYKG CCCCEEEECCCCCCCCCEECCCCCEEEEHHHHHHHHHCCCEEEECCCEEEHHHHCCCCCC EFDQLSPKFKGEYQTTENLKLRVGYGRLFKGASLPETLTMKAPSKVKQSDTKAMTGNNYE CHHHCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEEECCCCHHHHCCCCEECCCCCC AGFDYELTRLLAADYAILGFTAYTYDLDNQMHPTKNNATLSNKYDVEVWGVETVLSYQLD CCCCHHHHHHHHHCHHEEEEEEEEEECCCCCCCCCCCCEECCCEEEEEEEHHHHHHHCCE ALSVYANHSYSDGEQKSLKNGKTSHMNKTGIHNFKAGFNYSLNNEFVFGWDSRFVPGNDY EEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC ENEKGKEIKRSGFATHNIWAAYTPTFAKDLEMNLGIDNLLDKKYAEHTGFGISWGSEKYT CCCCCHHHHHCCCCCCCEEEEECCCHHHCCEECCCHHHHHHHHHHHHCCCCEECCCCCCC SYEAGRNFKASIAYSF HHHCCCCEEEEEEECC >Mature Secondary Structure MKLKALSVAVTVALTSFTAFAADEPETVVVIGSALDQLIQTEINSDTLEKKQASDIKDVL CCEEEEEEEEEEEEHHHEEECCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NTMPSVTVDGNARYSRKVFVRGMEDKFAVVTIDGARQEGQLFHHSGDQAIDPAMLKRAEI HHCCCEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHEEEEE ELGGNSALSGSGAINGSFSYETKDPSDLLKPGESVGARVKTSYQTAYERFATNVAVYAKV EECCCCCCCCCCCCCCEEEECCCCHHHHHCCCHHHCCEEEHHHHHHHHHHHCCEEEEEEE NDKLQFMGIANYSEDGDLHIPDQEAVTSKQGELKSGLAKVVFIPNDANEFKLTFNRYSDG CCCEEEEEEECCCCCCCEECCCHHHHHCCCCHHHCCCEEEEEECCCCCEEEEEEEEECCC GTRQLSGEKAGALYADDKHDYHSLNRDTVTLQHEYDAGSDLVHLKSNVYYNRQYMDRDAL CCEEECCCCCCEEEECCCCHHHCCCCCEEEEEECCCCCCCEEEEECCEEECHHHCCCHHC EGTAWGKTPAGKWFKDGKMSYPKREYNVTTIGGDIRNVSWVGEHELTYGLEGYKAKQWID CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEECCCCCCHHHHHC AGQGVYLSGTKQGQTENYSMDGGTVTAYGLYLQDMYEFSDFRLTTGLRYDVHKLGGVYKG CCCCEEEECCCCCCCCCEECCCCCEEEEHHHHHHHHHCCCEEEECCCEEEHHHHCCCCCC EFDQLSPKFKGEYQTTENLKLRVGYGRLFKGASLPETLTMKAPSKVKQSDTKAMTGNNYE CHHHCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEEECCCCHHHHCCCCEECCCCCC AGFDYELTRLLAADYAILGFTAYTYDLDNQMHPTKNNATLSNKYDVEVWGVETVLSYQLD CCCCHHHHHHHHHCHHEEEEEEEEEECCCCCCCCCCCCEECCCEEEEEEEHHHHHHHCCE ALSVYANHSYSDGEQKSLKNGKTSHMNKTGIHNFKAGFNYSLNNEFVFGWDSRFVPGNDY EEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC ENEKGKEIKRSGFATHNIWAAYTPTFAKDLEMNLGIDNLLDKKYAEHTGFGISWGSEKYT CCCCCHHHHHCCCCCCCEEEEECCCHHHCCEECCCHHHHHHHHHHHHCCCCEECCCCCCC SYEAGRNFKASIAYSF HHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA