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The map label for this gene is yiiM [H]

Identifier: 218709811

GI number: 218709811

Start: 1962742

End: 1963452

Strand: Reverse

Name: yiiM [H]

Synonym: VS_1823

Alternate gene names: 218709811

Gene position: 1963452-1962742 (Counterclockwise)

Preceding gene: 218709812

Following gene: 218709808

Centisome position: 59.51

GC content: 47.12

Gene sequence:

>711_bases
TTGCTGAAAAGGAAGGGTATGAAGAAGTTAGGTACAGTAAACAGTGTTTTGGGCGGTAAGGTCGTTGCTTTTGCTCACGG
TACACAGAGTGCTATCAATAAGCAGGTTTTATCTGAGCGCCAATACGCCACTGAGCTTGGATTTATTAACGATGAGCAAG
GCGACCCTCGCTTTCATGGCGGTATTCAGAAAGCCCTTCATATCTACCCAAGCGAGCACTACTTAATTTGGCAGGAGGAG
TTGGGCGACAAAGCAATCTTCCAATCTGAAGGTGCATTTGGTGAGAACATAAGTTCAAGTGGGGTGACTGAAGCTTCCAT
TTGTTTAAAAGATAAGATTCGAATTGGTTCAACCTTGCTGGAAGTTTCACAAGGTCGTATGCCTTGTTGGAAGCTCAATG
TACGATTCGATCAAAATGATATGGCGAAAAGGCTACAAGACACCCTTCGAACTGGCTGGTACTTCCGTGTTTTGGAAGAG
GGTGATATCGGCTCCGGCGACGAGATTATCCTGTGTGAAAGACCTTACCCAGAATGGCCGTTAAGCCGGGTTATGGGTGC
GGTGTTCACGGGTTGTTTGGATAAACAAGAGCTTAGAGAATTGGCGGAGCTGCCTCTAGTGGAATCTTGGGGCACGCTCG
TAGAACGTCGACTTCAAACTGGCGAAGTTGAAGATTGGGAAATGAGATTGGTTGGCCCGACAGCCGAGTAG

Upstream 100 bases:

>100_bases
CGTGCAAGTATTAGTCAGCTTCATGAAAGACTTTGAAGAGAAATACGCTTAATTAAGGCGTATTTCACAATAAGAGGAGC
GAAAGCTCCTCTTTTTTTAC

Downstream 100 bases:

>100_bases
ACTTTCTATTCATGCTTAAAAGACAATCATGCGCAAAACAAAACGCTCACTATCTAGAAGATGTGAGCGTTTTTAGTTCT
GAGGTGAGTACTTATTAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLKRKGMKKLGTVNSVLGGKVVAFAHGTQSAINKQVLSERQYATELGFINDEQGDPRFHGGIQKALHIYPSEHYLIWQEE
LGDKAIFQSEGAFGENISSSGVTEASICLKDKIRIGSTLLEVSQGRMPCWKLNVRFDQNDMAKRLQDTLRTGWYFRVLEE
GDIGSGDEIILCERPYPEWPLSRVMGAVFTGCLDKQELRELAELPLVESWGTLVERRLQTGEVEDWEMRLVGPTAE

Sequences:

>Translated_236_residues
MLKRKGMKKLGTVNSVLGGKVVAFAHGTQSAINKQVLSERQYATELGFINDEQGDPRFHGGIQKALHIYPSEHYLIWQEE
LGDKAIFQSEGAFGENISSSGVTEASICLKDKIRIGSTLLEVSQGRMPCWKLNVRFDQNDMAKRLQDTLRTGWYFRVLEE
GDIGSGDEIILCERPYPEWPLSRVMGAVFTGCLDKQELRELAELPLVESWGTLVERRLQTGEVEDWEMRLVGPTAE
>Mature_236_residues
MLKRKGMKKLGTVNSVLGGKVVAFAHGTQSAINKQVLSERQYATELGFINDEQGDPRFHGGIQKALHIYPSEHYLIWQEE
LGDKAIFQSEGAFGENISSSGVTEASICLKDKIRIGSTLLEVSQGRMPCWKLNVRFDQNDMAKRLQDTLRTGWYFRVLEE
GDIGSGDEIILCERPYPEWPLSRVMGAVFTGCLDKQELRELAELPLVESWGTLVERRLQTGEVEDWEMRLVGPTAE

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=217, Percent_Identity=36.405529953917, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 26591; Mature: 26591

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRKGMKKLGTVNSVLGGKVVAFAHGTQSAINKQVLSERQYATELGFINDEQGDPRFHG
CCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
GIQKALHIYPSEHYLIWQEELGDKAIFQSEGAFGENISSSGVTEASICLKDKIRIGSTLL
HHHHHHEECCCCCEEEEHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EVSQGRMPCWKLNVRFDQNDMAKRLQDTLRTGWYFRVLEEGDIGSGDEIILCERPYPEWP
HHHCCCCCEEEEEEEECHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCCCCC
LSRVMGAVFTGCLDKQELRELAELPLVESWGTLVERRLQTGEVEDWEMRLVGPTAE
HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MLKRKGMKKLGTVNSVLGGKVVAFAHGTQSAINKQVLSERQYATELGFINDEQGDPRFHG
CCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
GIQKALHIYPSEHYLIWQEELGDKAIFQSEGAFGENISSSGVTEASICLKDKIRIGSTLL
HHHHHHEECCCCCEEEEHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EVSQGRMPCWKLNVRFDQNDMAKRLQDTLRTGWYFRVLEEGDIGSGDEIILCERPYPEWP
HHHCCCCCEEEEEEEECHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCCCCC
LSRVMGAVFTGCLDKQELRELAELPLVESWGTLVERRLQTGEVEDWEMRLVGPTAE
HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]