| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709281
Identifier: 218709281
GI number: 218709281
Start: 1384675
End: 1385058
Strand: Direct
Name: 218709281
Synonym: VS_1288
Alternate gene names: NA
Gene position: 1384675-1385058 (Clockwise)
Preceding gene: 218709280
Following gene: 218709283
Centisome position: 41.97
GC content: 36.2
Gene sequence:
>384_bases ATGTTGACTGCTATGTCTTCTGGGACGTTTGCAGACGATCGACTAGATAAATATTACGCGAAAGTCCAAGAGTGCATAGA TTTTGAAAAAGCCAAGCCTGATTTAACCACGCATTTGGTATCTCTCAAAGATATGGAATATCTACCTCTAATTCGTAGCT TGAGAATAGAATCTTGTTCAAAATCAGAAGAGCTGAACTACATTGGCAGCATAAATGAATCTGACCCAAAAACAACGCTC TCTGTTTATAACGAAATGGATTCTTCGAAGCTGACAGAGGAAGAATTGATTTTTATAAAACAACTCGATAAACGGCTTCA AAACTACAATCTCGAGACTGATTTATTACTCATATACGAAAAGTTGAAAGTAGATCAAAAGTAG
Upstream 100 bases:
>100_bases ATTTCAGCAAGAATGTATATGAAACCATCGTTAACGTATCAAGAAAAAATGTTTTGGAGGTGTATGTATCATGCGATGCG CTAAGCTAACAGCTTGTTTA
Downstream 100 bases:
>100_bases TGAAGTAATTAGAAGCATAATACAAGAGGTGGTTTTAACCACCTTTTCTTCGTATGGTATTAGGGAAGGAAATATAAACG CTAGATAAGAGGTAGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCSKSEELNYIGSINESDPKTTL SVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYEKLKVDQK
Sequences:
>Translated_127_residues MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCSKSEELNYIGSINESDPKTTL SVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYEKLKVDQK >Mature_127_residues MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCSKSEELNYIGSINESDPKTTL SVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYEKLKVDQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14784; Mature: 14784
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC KSEELNYIGSINESDPKTTLSVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYE CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH KLKVDQK HHHCCCC >Mature Secondary Structure MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC KSEELNYIGSINESDPKTTLSVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYE CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH KLKVDQK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA