Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709281

Identifier: 218709281

GI number: 218709281

Start: 1384675

End: 1385058

Strand: Direct

Name: 218709281

Synonym: VS_1288

Alternate gene names: NA

Gene position: 1384675-1385058 (Clockwise)

Preceding gene: 218709280

Following gene: 218709283

Centisome position: 41.97

GC content: 36.2

Gene sequence:

>384_bases
ATGTTGACTGCTATGTCTTCTGGGACGTTTGCAGACGATCGACTAGATAAATATTACGCGAAAGTCCAAGAGTGCATAGA
TTTTGAAAAAGCCAAGCCTGATTTAACCACGCATTTGGTATCTCTCAAAGATATGGAATATCTACCTCTAATTCGTAGCT
TGAGAATAGAATCTTGTTCAAAATCAGAAGAGCTGAACTACATTGGCAGCATAAATGAATCTGACCCAAAAACAACGCTC
TCTGTTTATAACGAAATGGATTCTTCGAAGCTGACAGAGGAAGAATTGATTTTTATAAAACAACTCGATAAACGGCTTCA
AAACTACAATCTCGAGACTGATTTATTACTCATATACGAAAAGTTGAAAGTAGATCAAAAGTAG

Upstream 100 bases:

>100_bases
ATTTCAGCAAGAATGTATATGAAACCATCGTTAACGTATCAAGAAAAAATGTTTTGGAGGTGTATGTATCATGCGATGCG
CTAAGCTAACAGCTTGTTTA

Downstream 100 bases:

>100_bases
TGAAGTAATTAGAAGCATAATACAAGAGGTGGTTTTAACCACCTTTTCTTCGTATGGTATTAGGGAAGGAAATATAAACG
CTAGATAAGAGGTAGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCSKSEELNYIGSINESDPKTTL
SVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYEKLKVDQK

Sequences:

>Translated_127_residues
MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCSKSEELNYIGSINESDPKTTL
SVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYEKLKVDQK
>Mature_127_residues
MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCSKSEELNYIGSINESDPKTTL
SVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYEKLKVDQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14784; Mature: 14784

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC
KSEELNYIGSINESDPKTTLSVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYE
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KLKVDQK
HHHCCCC
>Mature Secondary Structure
MLTAMSSGTFADDRLDKYYAKVQECIDFEKAKPDLTTHLVSLKDMEYLPLIRSLRIESCS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC
KSEELNYIGSINESDPKTTLSVYNEMDSSKLTEEELIFIKQLDKRLQNYNLETDLLLIYE
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KLKVDQK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA