Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218709261
Identifier: 218709261
GI number: 218709261
Start: 1367940
End: 1368518
Strand: Direct
Name: 218709261
Synonym: VS_1268
Alternate gene names: NA
Gene position: 1367940-1368518 (Clockwise)
Preceding gene: 218709258
Following gene: 218709262
Centisome position: 41.46
GC content: 33.33
Gene sequence:
>579_bases ATGATTGAAAAACTAGAATTAGCATGTGGCTCTATGAGTTCTCGTTATACGAATATTTTGTCTCAATATTACCCAGCTCA CGGTAGCACAGGGTTTACAGAACGAAATTTAACCAATAACTTAGTTAGAGCCTTAGAAGATGCTTTTGGTGAAAAATGCA TATCTTGGTTTGAGGCTCCTATATGTCTTAAAGATGGCAAGCATATTGATGCTGTGGTGTTTTATGAAGATATTACTATT TTAATTGAAGCGAAAAGACTTACATCGGTAAAATCGCAGATTGGTGCTATTGAACACGATATCGAACGAATGTTTTCTAC TGACACAATTGATATGTTGGAAGAAAAATTTAGTTCGAATCATAGTAAACGTAGACGGTACTCAATAGTACTCGCAGATG TTTGGACTGAAAATGATGAAAAAATAAATGTGTATAAATCTTGGCCTAACCAGTTACCATCACATTTTCTTGAAACGCTA TTATTCTCCAAATCCTTACCTTTCAATCATTTATGCGTTGAAGAAAATTGGAAGAATAACTATAAAATACTGATCGCAGT GTCAGAAATAAAAATATAA
Upstream 100 bases:
>100_bases GTCGTTTAAGATAGGCTACATAAGAAACTAGATAGAAAAATTCTGCATTTAAGTACAGAATTTCTCTGTCTGATAGCTGT TATATTTTTTAGGTTAAACG
Downstream 100 bases:
>100_bases CAAATTGCTCAAAACGGACTGTTAACGCTTGGTATTTTCAGTTCCAATAGGTTCGTGTTTAAGGTGCGTTGCTTTTAGTT GAGTGTACGTTATCAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAPICLKDGKHIDAVVFYEDITI LIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSNHSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETL LFSKSLPFNHLCVEENWKNNYKILIAVSEIKI
Sequences:
>Translated_192_residues MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAPICLKDGKHIDAVVFYEDITI LIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSNHSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETL LFSKSLPFNHLCVEENWKNNYKILIAVSEIKI >Mature_192_residues MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAPICLKDGKHIDAVVFYEDITI LIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSNHSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETL LFSKSLPFNHLCVEENWKNNYKILIAVSEIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22231; Mature: 22231
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAP CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ICLKDGKHIDAVVFYEDITILIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSN EEECCCCCEEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC HSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETLLFSKSLPFNHLCVEENWKNN CCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC YKILIAVSEIKI EEEEEEEEEECC >Mature Secondary Structure MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAP CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ICLKDGKHIDAVVFYEDITILIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSN EEECCCCCEEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC HSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETLLFSKSLPFNHLCVEENWKNN CCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC YKILIAVSEIKI EEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA