Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709261

Identifier: 218709261

GI number: 218709261

Start: 1367940

End: 1368518

Strand: Direct

Name: 218709261

Synonym: VS_1268

Alternate gene names: NA

Gene position: 1367940-1368518 (Clockwise)

Preceding gene: 218709258

Following gene: 218709262

Centisome position: 41.46

GC content: 33.33

Gene sequence:

>579_bases
ATGATTGAAAAACTAGAATTAGCATGTGGCTCTATGAGTTCTCGTTATACGAATATTTTGTCTCAATATTACCCAGCTCA
CGGTAGCACAGGGTTTACAGAACGAAATTTAACCAATAACTTAGTTAGAGCCTTAGAAGATGCTTTTGGTGAAAAATGCA
TATCTTGGTTTGAGGCTCCTATATGTCTTAAAGATGGCAAGCATATTGATGCTGTGGTGTTTTATGAAGATATTACTATT
TTAATTGAAGCGAAAAGACTTACATCGGTAAAATCGCAGATTGGTGCTATTGAACACGATATCGAACGAATGTTTTCTAC
TGACACAATTGATATGTTGGAAGAAAAATTTAGTTCGAATCATAGTAAACGTAGACGGTACTCAATAGTACTCGCAGATG
TTTGGACTGAAAATGATGAAAAAATAAATGTGTATAAATCTTGGCCTAACCAGTTACCATCACATTTTCTTGAAACGCTA
TTATTCTCCAAATCCTTACCTTTCAATCATTTATGCGTTGAAGAAAATTGGAAGAATAACTATAAAATACTGATCGCAGT
GTCAGAAATAAAAATATAA

Upstream 100 bases:

>100_bases
GTCGTTTAAGATAGGCTACATAAGAAACTAGATAGAAAAATTCTGCATTTAAGTACAGAATTTCTCTGTCTGATAGCTGT
TATATTTTTTAGGTTAAACG

Downstream 100 bases:

>100_bases
CAAATTGCTCAAAACGGACTGTTAACGCTTGGTATTTTCAGTTCCAATAGGTTCGTGTTTAAGGTGCGTTGCTTTTAGTT
GAGTGTACGTTATCAGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAPICLKDGKHIDAVVFYEDITI
LIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSNHSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETL
LFSKSLPFNHLCVEENWKNNYKILIAVSEIKI

Sequences:

>Translated_192_residues
MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAPICLKDGKHIDAVVFYEDITI
LIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSNHSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETL
LFSKSLPFNHLCVEENWKNNYKILIAVSEIKI
>Mature_192_residues
MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAPICLKDGKHIDAVVFYEDITI
LIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSNHSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETL
LFSKSLPFNHLCVEENWKNNYKILIAVSEIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22231; Mature: 22231

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAP
CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ICLKDGKHIDAVVFYEDITILIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSN
EEECCCCCEEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
HSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETLLFSKSLPFNHLCVEENWKNN
CCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
YKILIAVSEIKI
EEEEEEEEEECC
>Mature Secondary Structure
MIEKLELACGSMSSRYTNILSQYYPAHGSTGFTERNLTNNLVRALEDAFGEKCISWFEAP
CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ICLKDGKHIDAVVFYEDITILIEAKRLTSVKSQIGAIEHDIERMFSTDTIDMLEEKFSSN
EEECCCCCEEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
HSKRRRYSIVLADVWTENDEKINVYKSWPNQLPSHFLETLLFSKSLPFNHLCVEENWKNN
CCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
YKILIAVSEIKI
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA