Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218709258
Identifier: 218709258
GI number: 218709258
Start: 1363573
End: 1363869
Strand: Direct
Name: 218709258
Synonym: VS_1265
Alternate gene names: NA
Gene position: 1363573-1363869 (Clockwise)
Preceding gene: 218709257
Following gene: 218709261
Centisome position: 41.33
GC content: 42.42
Gene sequence:
>297_bases ATGATTCGTCATATTCTACTGATTAAGTTTAAAGAAAACGCTGAAGCTTCAGAGGTTCAAAAACTAAAGATGCTGTTTGA AGCGATGCCAAACAAGGTGGAAGGGGTCACTTCAGTAGAATGGGGATTAAATGACAGCCCTGAAAACAAGAATCAAGGTT ATACCCACTCGGTGTTAATGACGTTCGCCGATGAAGAAGGCCGCCAGAATTACCTTCCGCACCCAGAGCATGATGCGCTG AAAGATGTGTTTCGTCCGCTTTTAGAAGACATCATTGTGTTTGATTACTCCTTGTAA
Upstream 100 bases:
>100_bases TTGTTCTCTAATTTAGATCGCTATTAGGTGTTGGTTAAGCATTACAAACCAGTAAGCGAACGACTCGAAAGGACAAGGAA TGACTCAAAAAGAAACGGGA
Downstream 100 bases:
>100_bases TTAGGTTCTGAGTAGATTTTTTGTGTTTGACTTACCTTCGATAATGAAGAGTTAGGGCCTAGCGATTAAGCCCTAACTAA ATAAGAAACGACTTACTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Stress Responsive A/B Barrel Domain Superfamily; Stress Responsive A/B Barrel Domain Family Protein
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MIRHILLIKFKENAEASEVQKLKMLFEAMPNKVEGVTSVEWGLNDSPENKNQGYTHSVLMTFADEEGRQNYLPHPEHDAL KDVFRPLLEDIIVFDYSL
Sequences:
>Translated_98_residues MIRHILLIKFKENAEASEVQKLKMLFEAMPNKVEGVTSVEWGLNDSPENKNQGYTHSVLMTFADEEGRQNYLPHPEHDAL KDVFRPLLEDIIVFDYSL >Mature_98_residues MIRHILLIKFKENAEASEVQKLKMLFEAMPNKVEGVTSVEWGLNDSPENKNQGYTHSVLMTFADEEGRQNYLPHPEHDAL KDVFRPLLEDIIVFDYSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11361; Mature: 11361
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRHILLIKFKENAEASEVQKLKMLFEAMPNKVEGVTSVEWGLNDSPENKNQGYTHSVLM CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHE TFADEEGRQNYLPHPEHDALKDVFRPLLEDIIVFDYSL EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIRHILLIKFKENAEASEVQKLKMLFEAMPNKVEGVTSVEWGLNDSPENKNQGYTHSVLM CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHE TFADEEGRQNYLPHPEHDALKDVFRPLLEDIIVFDYSL EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA