| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is sglT [H]
Identifier: 218709250
GI number: 218709250
Start: 1353901
End: 1355673
Strand: Direct
Name: sglT [H]
Synonym: VS_1257
Alternate gene names: 218709250
Gene position: 1353901-1355673 (Clockwise)
Preceding gene: 218709249
Following gene: 218709253
Centisome position: 41.04
GC content: 47.32
Gene sequence:
>1773_bases ATGGAACTCAATACCCTGATAGTTGGCATCTACTTCCTATTCTTAATTGCGATAGGGTGGATGTTCCGAACGTTTACAAG TACGACAAGTGATTACTTCCGTGGGGGAGGTAATATGCTGTGGTGGATGGTAGGTGCAACCGCATTTATGACCCAGTTCA GTGCTTGGACATTTACTGGTGCAGCAGGTAAAGCTTTTACCGATGGTTTTGCCGTAGCGATTATCTTCATCGCGAACGCA TTCGGTTACCTAATGAACTACCTTTACTTCGCTCCGAAGTTCCGCCAACTGCGCGTTGTGACGGTAATTGAAGCGATTCG TATGCGTTTTGGTAAGGTGAATGAGCAAGTATTTACTTGGTCTGGCATGCCAAACAGCGTTATCTCTGCTGGTATCTGGT TGAACGGCCTTGCGATCATCGCATCGGGTATCTTCGGCTTTGATATGACAACGACGATTGTCCTAACGGGTCTGGTTGTA CTGGTAATGTCAGTAACAGGCGGCTCTTGGGCGGTAATCGCATCTGACTTTATGCAGATGGTTATCATCATGGCGGTAAC GGTGACGTGTGCTGTGGTTGCGATTTACCACGGTGGCGGCGTTACGCAGATCGTTAACGACTTCCCAACAGGTTCATTCA TTACGGGTGATAACCTGAACTACATGAGCATCTTCAGCATCTGGGCTGTGTTCATCTTCTTAAAGCAGTTCAGCATCACC AACAACATGCTTAACTCTTACCGTTACCTTGCTGCGAAAGACTCAAACAACGCACGTAAAGCTGCACTGCTTGCTTGTGT ACTAATGACGCTTGGTCCAATCATCTGGTTCATGCCTTCTTGGTTCATGGCAGGTCAAGGTGTTGATTTAGCAGCAGCTT ACCCAGACGCTGGCAGCAAAGCCGCTGACTTCGCTTACCTTTACTTTGTTCAAGAATACATGCCTGCAGGTATGGTTGGC CTTCTGATTGCCGCTATGTTTGCTGCGACTATGTCTTCAATGGACTCTGGTCTAAACCGTAACTCAGGTATCTTTGTTAA GAACTTCTACGAGCCGATTCTTCGTCCTAAAGCGACAGAGAAAGAGCTAATGGTTGTTTCTAAGCTAACGTCTACTTTCT TCGGTATCGCGATCATCTTGGTTGCTCTGTTCATCAACTCTCTTAAAGGTCTGAGCCTTTTCGACACCATGATGTACGTG GGCGCATTGATCGGCTTCCCTATGACAATTCCAGCATTCTGTGGCTTCTTCATCCGTAAAACACCGGATTGGGCAGGTTG GGGTACGCTAGTAGTCGGTGGTGTGGTTTCTTACTTCGTTGGTTTCGTTATCACAGCGGACATGATTCAAAACTGGTTCG GTCTAAACGAACTAACTGGCCGTGAGTGGGCTGACCTGAAAGTGGCTATCGGCCTTATCGGTCACATCGTATTTACTGCT GGCTTCTTCGTTCTTTCAACACTGTTCTACAAGCCATTACCGGAACACCGTGAGAAAGACGTCGACAAGTTCTTCAATAA CCTAGCGACACCGTTAGTTGCTGAGAGTAATGAACAGAAGAAACTGGATAACAAGCAACGTCGTATGTTGGGGTCACTTA TCGCGGTAGCGGGTGTGGGCGTAATGACTATGTTTGTACTGCCAAACCCAATGTGGGGACGCATGGTATTCGTTCTGTGT GGTTTGATTGTGTTCTCTGTCGGCCTGTTACTTGTTAAAGCGGTCGATGACAAAGTCGAGCAACAAGACGAAGTGACGCC AGCCGAAGGCTAA
Upstream 100 bases:
>100_bases GTAAGATCACTGTCACGCATTTAAGTTATTGTAGTACAAATATAGTTACCATCTATCTATAGTGACCTTAACAAAAAAAC ATGAATAAAAAGGTCTCAAG
Downstream 100 bases:
>100_bases TTCCTTTTAAATCAAAAACTATAACTTTTTACAGCGGCTACCGATTGCGGTAGCCGTTCGTTTGAACTGCCAAAGTTTAA TGTGATATGTACGGAGAGCT
Product: putative sodium/glucose cotransporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MELNTLIVGIYFLFLIAIGWMFRTFTSTTSDYFRGGGNMLWWMVGATAFMTQFSAWTFTGAAGKAFTDGFAVAIIFIANA FGYLMNYLYFAPKFRQLRVVTVIEAIRMRFGKVNEQVFTWSGMPNSVISAGIWLNGLAIIASGIFGFDMTTTIVLTGLVV LVMSVTGGSWAVIASDFMQMVIIMAVTVTCAVVAIYHGGGVTQIVNDFPTGSFITGDNLNYMSIFSIWAVFIFLKQFSIT NNMLNSYRYLAAKDSNNARKAALLACVLMTLGPIIWFMPSWFMAGQGVDLAAAYPDAGSKAADFAYLYFVQEYMPAGMVG LLIAAMFAATMSSMDSGLNRNSGIFVKNFYEPILRPKATEKELMVVSKLTSTFFGIAIILVALFINSLKGLSLFDTMMYV GALIGFPMTIPAFCGFFIRKTPDWAGWGTLVVGGVVSYFVGFVITADMIQNWFGLNELTGREWADLKVAIGLIGHIVFTA GFFVLSTLFYKPLPEHREKDVDKFFNNLATPLVAESNEQKKLDNKQRRMLGSLIAVAGVGVMTMFVLPNPMWGRMVFVLC GLIVFSVGLLLVKAVDDKVEQQDEVTPAEG
Sequences:
>Translated_590_residues MELNTLIVGIYFLFLIAIGWMFRTFTSTTSDYFRGGGNMLWWMVGATAFMTQFSAWTFTGAAGKAFTDGFAVAIIFIANA FGYLMNYLYFAPKFRQLRVVTVIEAIRMRFGKVNEQVFTWSGMPNSVISAGIWLNGLAIIASGIFGFDMTTTIVLTGLVV LVMSVTGGSWAVIASDFMQMVIIMAVTVTCAVVAIYHGGGVTQIVNDFPTGSFITGDNLNYMSIFSIWAVFIFLKQFSIT NNMLNSYRYLAAKDSNNARKAALLACVLMTLGPIIWFMPSWFMAGQGVDLAAAYPDAGSKAADFAYLYFVQEYMPAGMVG LLIAAMFAATMSSMDSGLNRNSGIFVKNFYEPILRPKATEKELMVVSKLTSTFFGIAIILVALFINSLKGLSLFDTMMYV GALIGFPMTIPAFCGFFIRKTPDWAGWGTLVVGGVVSYFVGFVITADMIQNWFGLNELTGREWADLKVAIGLIGHIVFTA GFFVLSTLFYKPLPEHREKDVDKFFNNLATPLVAESNEQKKLDNKQRRMLGSLIAVAGVGVMTMFVLPNPMWGRMVFVLC GLIVFSVGLLLVKAVDDKVEQQDEVTPAEG >Mature_590_residues MELNTLIVGIYFLFLIAIGWMFRTFTSTTSDYFRGGGNMLWWMVGATAFMTQFSAWTFTGAAGKAFTDGFAVAIIFIANA FGYLMNYLYFAPKFRQLRVVTVIEAIRMRFGKVNEQVFTWSGMPNSVISAGIWLNGLAIIASGIFGFDMTTTIVLTGLVV LVMSVTGGSWAVIASDFMQMVIIMAVTVTCAVVAIYHGGGVTQIVNDFPTGSFITGDNLNYMSIFSIWAVFIFLKQFSIT NNMLNSYRYLAAKDSNNARKAALLACVLMTLGPIIWFMPSWFMAGQGVDLAAAYPDAGSKAADFAYLYFVQEYMPAGMVG LLIAAMFAATMSSMDSGLNRNSGIFVKNFYEPILRPKATEKELMVVSKLTSTFFGIAIILVALFINSLKGLSLFDTMMYV GALIGFPMTIPAFCGFFIRKTPDWAGWGTLVVGGVVSYFVGFVITADMIQNWFGLNELTGREWADLKVAIGLIGHIVFTA GFFVLSTLFYKPLPEHREKDVDKFFNNLATPLVAESNEQKKLDNKQRRMLGSLIAVAGVGVMTMFVLPNPMWGRMVFVLC GLIVFSVGLLLVKAVDDKVEQQDEVTPAEG
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI17941285, Length=461, Percent_Identity=27.765726681128, Blast_Score=116, Evalue=6e-26, Organism=Homo sapiens, GI4507031, Length=454, Percent_Identity=26.8722466960352, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI14140236, Length=472, Percent_Identity=26.4830508474576, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI4507033, Length=464, Percent_Identity=24.1379310344828, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI110835708, Length=413, Percent_Identity=26.8765133171913, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI109659836, Length=468, Percent_Identity=25, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI109659839, Length=482, Percent_Identity=24.0663900414938, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI206597483, Length=596, Percent_Identity=24.6644295302013, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI157671931, Length=398, Percent_Identity=22.6130653266332, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI4507035, Length=399, Percent_Identity=22.5563909774436, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI167466278, Length=398, Percent_Identity=24.3718592964824, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI206597487, Length=528, Percent_Identity=24.6212121212121, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310128183, Length=405, Percent_Identity=22.2222222222222, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1790113, Length=450, Percent_Identity=23.7777777777778, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17539284, Length=465, Percent_Identity=23.8709677419355, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI221459586, Length=401, Percent_Identity=22.1945137157107, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24651739, Length=362, Percent_Identity=23.2044198895028, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221379702, Length=338, Percent_Identity=24.2603550295858, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI221459588, Length=373, Percent_Identity=22.7882037533512, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI221459584, Length=356, Percent_Identity=21.6292134831461, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 64891; Mature: 64891
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNTLIVGIYFLFLIAIGWMFRTFTSTTSDYFRGGGNMLWWMVGATAFMTQFSAWTFTG CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEC AAGKAFTDGFAVAIIFIANAFGYLMNYLYFAPKFRQLRVVTVIEAIRMRFGKVNEQVFTW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE SGMPNSVISAGIWLNGLAIIASGIFGFDMTTTIVLTGLVVLVMSVTGGSWAVIASDFMQM CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VIIMAVTVTCAVVAIYHGGGVTQIVNDFPTGSFITGDNLNYMSIFSIWAVFIFLKQFSIT HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH NNMLNSYRYLAAKDSNNARKAALLACVLMTLGPIIWFMPSWFMAGQGVDLAAAYPDAGSK HHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC AADFAYLYFVQEYMPAGMVGLLIAAMFAATMSSMDSGLNRNSGIFVKNFYEPILRPKATE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCH KELMVVSKLTSTFFGIAIILVALFINSLKGLSLFDTMMYVGALIGFPMTIPAFCGFFIRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC TPDWAGWGTLVVGGVVSYFVGFVITADMIQNWFGLNELTGREWADLKVAIGLIGHIVFTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH GFFVLSTLFYKPLPEHREKDVDKFFNNLATPLVAESNEQKKLDNKQRRMLGSLIAVAGVG HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VMTMFVLPNPMWGRMVFVLCGLIVFSVGLLLVKAVDDKVEQQDEVTPAEG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MELNTLIVGIYFLFLIAIGWMFRTFTSTTSDYFRGGGNMLWWMVGATAFMTQFSAWTFTG CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEHHHHHHHHHHHHHHHHEEEC AAGKAFTDGFAVAIIFIANAFGYLMNYLYFAPKFRQLRVVTVIEAIRMRFGKVNEQVFTW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE SGMPNSVISAGIWLNGLAIIASGIFGFDMTTTIVLTGLVVLVMSVTGGSWAVIASDFMQM CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VIIMAVTVTCAVVAIYHGGGVTQIVNDFPTGSFITGDNLNYMSIFSIWAVFIFLKQFSIT HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH NNMLNSYRYLAAKDSNNARKAALLACVLMTLGPIIWFMPSWFMAGQGVDLAAAYPDAGSK HHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC AADFAYLYFVQEYMPAGMVGLLIAAMFAATMSSMDSGLNRNSGIFVKNFYEPILRPKATE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCH KELMVVSKLTSTFFGIAIILVALFINSLKGLSLFDTMMYVGALIGFPMTIPAFCGFFIRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC TPDWAGWGTLVVGGVVSYFVGFVITADMIQNWFGLNELTGREWADLKVAIGLIGHIVFTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH GFFVLSTLFYKPLPEHREKDVDKFFNNLATPLVAESNEQKKLDNKQRRMLGSLIAVAGVG HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VMTMFVLPNPMWGRMVFVLCGLIVFSVGLLLVKAVDDKVEQQDEVTPAEG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]