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The map label for this gene is yqfB [C]

Identifier: 218709225

GI number: 218709225

Start: 1307356

End: 1307670

Strand: Direct

Name: yqfB [C]

Synonym: VS_1232

Alternate gene names: 218709225

Gene position: 1307356-1307670 (Clockwise)

Preceding gene: 218709224

Following gene: 218709226

Centisome position: 39.63

GC content: 43.49

Gene sequence:

>315_bases
ATGACCGCACCTACCACTATGACGTTCTTCGAACGTTTTGAAACCGATATCCTTTCTGGCAAGAAGACGATTACTATTCG
CGATGAATCTGAGCGCAACTACCAGCCGGGCAGTGTTGTAGAAGTATCAACGCTAGAGCAGGGACGTGTATTCTGTAATC
TTAAGATCATTAGCGTAGAACCAATCTTGTTTTATGACTTAGGTGAATTCCATGCTCAGCAAGAGAACATGACGCTAGAT
GTCCTCAAGGATGTGATTCAAGATATCTACCCAGGGATCTCTCAACTGTATGTGGTTTCTTACGAGCTTGTGTAA

Upstream 100 bases:

>100_bases
ATGACGAGATAAAATTCCGCATCTAATTTTTATTCGCTTGAACAGGCATTCTGGTATATAAACATTTACCTAACCTTTAA
ATGTTAAGCGACCGAGATAA

Downstream 100 bases:

>100_bases
CCCGCTTTAAATAGAATTTGTTGATCAATACAGCGTCTAACGCAGAGCAATGAGAAAGGGAGGTCACAATGAGTGAATTA
CAGAATGGTGCAGCTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTAPTTMTFFERFETDILSGKKTITIRDESERNYQPGSVVEVSTLEQGRVFCNLKIISVEPILFYDLGEFHAQQENMTLD
VLKDVIQDIYPGISQLYVVSYELV

Sequences:

>Translated_104_residues
MTAPTTMTFFERFETDILSGKKTITIRDESERNYQPGSVVEVSTLEQGRVFCNLKIISVEPILFYDLGEFHAQQENMTLD
VLKDVIQDIYPGISQLYVVSYELV
>Mature_103_residues
TAPTTMTFFERFETDILSGKKTITIRDESERNYQPGSVVEVSTLEQGRVFCNLKIISVEPILFYDLGEFHAQQENMTLDV
LKDVIQDIYPGISQLYVVSYELV

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family

Homologues:

Organism=Escherichia coli, GI1789267, Length=101, Percent_Identity=47.5247524752475, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1232_VIBSL (B7VN21)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416846.1
- ProteinModelPortal:   B7VN21
- GeneID:   7162768
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_1232
- HOGENOM:   HBG296598
- OMA:   RDEAESH
- ProtClustDB:   PRK04980
- HAMAP:   MF_00684
- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314
- PIRSF:   PIRSF029143

Pfam domain/function: PF04266 ASCH; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 11945; Mature: 11814

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPTTMTFFERFETDILSGKKTITIRDESERNYQPGSVVEVSTLEQGRVFCNLKIISVE
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEC
PILFYDLGEFHAQQENMTLDVLKDVIQDIYPGISQLYVVSYELV
CEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCHHEEEEEEEEEC
>Mature Secondary Structure 
TAPTTMTFFERFETDILSGKKTITIRDESERNYQPGSVVEVSTLEQGRVFCNLKIISVE
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEC
PILFYDLGEFHAQQENMTLDVLKDVIQDIYPGISQLYVVSYELV
CEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCHHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA