| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709136
Identifier: 218709136
GI number: 218709136
Start: 1211562
End: 1211762
Strand: Direct
Name: 218709136
Synonym: VS_1143
Alternate gene names: NA
Gene position: 1211562-1211762 (Clockwise)
Preceding gene: 218709135
Following gene: 218709138
Centisome position: 36.72
GC content: 35.32
Gene sequence:
>201_bases ATGGATTTAAGCAACGTCAAAGGTTTCGATAGCATTATTTTGCTGGGAATCGTGAATGAAAAACTTCGCTTAGAATGCGA TAGCTTTGAAGAGCTGATCAGTATGTATGAAATGGATATAGAAAGTGTTGTAGGTAAGCTTGATATGTTGGGCTATCAAT ACGATCCATTAACTAACCAGTTTAAGTCTTATCCAAGATAA
Upstream 100 bases:
>100_bases CTTTCGGTGTTGAATCGAAAAAGTGTGATCTGTTTTTTAGCGGGGTGTTGGTAAGCGTTCTAAACTTAAACCTAGTCGGT GTGTTCGTTAGGAGTACGGG
Downstream 100 bases:
>100_bases GCTCACAATGAGAGTTTCTTCTATCACGAATTAATACTCATTGCCTGTTGTCGGTATTGGTAATAAAAAGTCACAGATAA TCTGTGACTTTTTTGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MDLSNVKGFDSIILLGIVNEKLRLECDSFEELISMYEMDIESVVGKLDMLGYQYDPLTNQFKSYPR
Sequences:
>Translated_66_residues MDLSNVKGFDSIILLGIVNEKLRLECDSFEELISMYEMDIESVVGKLDMLGYQYDPLTNQFKSYPR >Mature_66_residues MDLSNVKGFDSIILLGIVNEKLRLECDSFEELISMYEMDIESVVGKLDMLGYQYDPLTNQFKSYPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7656; Mature: 7656
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSNVKGFDSIILLGIVNEKLRLECDSFEELISMYEMDIESVVGKLDMLGYQYDPLTNQ CCCCCCCCCCHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FKSYPR HCCCCC >Mature Secondary Structure MDLSNVKGFDSIILLGIVNEKLRLECDSFEELISMYEMDIESVVGKLDMLGYQYDPLTNQ CCCCCCCCCCHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FKSYPR HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA