| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709135
Identifier: 218709135
GI number: 218709135
Start: 1210760
End: 1211440
Strand: Direct
Name: 218709135
Synonym: VS_1142
Alternate gene names: NA
Gene position: 1210760-1211440 (Clockwise)
Preceding gene: 218709133
Following gene: 218709136
Centisome position: 36.7
GC content: 44.93
Gene sequence:
>681_bases ATGGTCGAAACGTTATTAGTACAATTTGCTCCGATGCTATTAGGAGCCCAACTGATCTTAACCCTCATCTTAGTGAAAGG GGATATTTGCCCGGGACAACGTGGCCGCATTCACAAGATGTTGCCTGCAATTGGCGTGCTTTGGCTTGCCGTTGCCTCAT TAAGAATTGAAGCATTTCTTGTCGTGTTCGCGATCTTTTATTTCTATTCTCAAGTTCAAACCAAGAAGACTCGAGATTCT GGCCCTATTTGGGTGATGTATTTAGCTTGTGGTTTAGCACTGTCATACGTTGCTATACAAGCGACGGAGCAAGCAACCAC AGTCGGTATTATTAGCACTTTATTACTCGTGGTTTTATTGGGGGCAGCGTTTGGTCATTTACTGCTGACGATTGCAAGAA CACGCTTACAGGCTTTTCACCGTGTTCTGCCCGTTGTTGGTGTGCTGACGGGGATGTTGGTGGTTTTGGCGACGGTCATC AATGTTTACTCTCTGTCTGAAGCTCAATTAGAGCCAATGATTTCAACTCTGCTGTTTAGCTTTGCTTTGCTAATCTCTGC TATCGTGGTGTGGTGTTGGCATTTATTGTTCGTTAAAACCCCTGAAAAGCTTCAGCTGACTATTTCATTGTTGATGTTAT TGGCGGCGGCTGTTGGTTTAACGCCAGTTTGGGCGATGTAG
Upstream 100 bases:
>100_bases TTGAAGCCTTGAATCTCGTCTCTAATTTATGATTTTGATTAGTGTTCGCACCAGTTTTTGATATTATTCGCGAAAATAAG TTTGAAGAAGTAGATCCACA
Downstream 100 bases:
>100_bases GCGGTTACTGATCTCACAAGCCTTTCGGTGTTGAATCGAAAAAGTGTGATCTGTTTTTTAGCGGGGTGTTGGTAAGCGTT CTAAACTTAAACCTAGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVETLLVQFAPMLLGAQLILTLILVKGDICPGQRGRIHKMLPAIGVLWLAVASLRIEAFLVVFAIFYFYSQVQTKKTRDS GPIWVMYLACGLALSYVAIQATEQATTVGIISTLLLVVLLGAAFGHLLLTIARTRLQAFHRVLPVVGVLTGMLVVLATVI NVYSLSEAQLEPMISTLLFSFALLISAIVVWCWHLLFVKTPEKLQLTISLLMLLAAAVGLTPVWAM
Sequences:
>Translated_226_residues MVETLLVQFAPMLLGAQLILTLILVKGDICPGQRGRIHKMLPAIGVLWLAVASLRIEAFLVVFAIFYFYSQVQTKKTRDS GPIWVMYLACGLALSYVAIQATEQATTVGIISTLLLVVLLGAAFGHLLLTIARTRLQAFHRVLPVVGVLTGMLVVLATVI NVYSLSEAQLEPMISTLLFSFALLISAIVVWCWHLLFVKTPEKLQLTISLLMLLAAAVGLTPVWAM >Mature_226_residues MVETLLVQFAPMLLGAQLILTLILVKGDICPGQRGRIHKMLPAIGVLWLAVASLRIEAFLVVFAIFYFYSQVQTKKTRDS GPIWVMYLACGLALSYVAIQATEQATTVGIISTLLLVVLLGAAFGHLLLTIARTRLQAFHRVLPVVGVLTGMLVVLATVI NVYSLSEAQLEPMISTLLFSFALLISAIVVWCWHLLFVKTPEKLQLTISLLMLLAAAVGLTPVWAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24688; Mature: 24688
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETLLVQFAPMLLGAQLILTLILVKGDICPGQRGRIHKMLPAIGVLWLAVASLRIEAFL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVFAIFYFYSQVQTKKTRDSGPIWVMYLACGLALSYVAIQATEQATTVGIISTLLLVVLL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAAFGHLLLTIARTRLQAFHRVLPVVGVLTGMLVVLATVINVYSLSEAQLEPMISTLLFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FALLISAIVVWCWHLLFVKTPEKLQLTISLLMLLAAAVGLTPVWAM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVETLLVQFAPMLLGAQLILTLILVKGDICPGQRGRIHKMLPAIGVLWLAVASLRIEAFL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVFAIFYFYSQVQTKKTRDSGPIWVMYLACGLALSYVAIQATEQATTVGIISTLLLVVLL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAAFGHLLLTIARTRLQAFHRVLPVVGVLTGMLVVLATVINVYSLSEAQLEPMISTLLFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FALLISAIVVWCWHLLFVKTPEKLQLTISLLMLLAAAVGLTPVWAM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA