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The map label for this gene is ygaW [H]

Identifier: 218709124

GI number: 218709124

Start: 1197204

End: 1197653

Strand: Direct

Name: ygaW [H]

Synonym: VS_1130

Alternate gene names: 218709124

Gene position: 1197204-1197653 (Clockwise)

Preceding gene: 218709123

Following gene: 218709125

Centisome position: 36.29

GC content: 43.78

Gene sequence:

>450_bases
ATGAAGTCTCGTGGTCCATTCTGTATTCGAAACGCAGCTGCGGATACATTCGCTATGGTCGTTTTCTGTTTTATTTCTGG
AATGATTGTTGAAGTGTTTATTTCTGGTATGACGTTTGAGCAGTCTCTTGCTTCTCGAACGTTATCTATTCCGGTAAACA
TAGCTATCGCTTGGCCTTATGGAGTCTTTCGTGATTGGTTCTTGCGTAACGGCGCAAAGCTTTCACAAAGCTCATTGATG
AAAAACTTGTCTGACTTGGTGGCGTACGTGTTATTCCAGTCACCTGTGTATGCCGGTATTTTATTGGCAGTAGGTGCTTC
AAGCGACCAGATTGTTACGGCTGTCACCAGTAACGCTGTTATCTCATGTGGTATGGGCGTGCTGTACGGTTACTTCTTAG
ATATGTGCCGTAAATGGTTTAGAGTTCCGGGCTACTATCAACAAGCTTAA

Upstream 100 bases:

>100_bases
GTGGTTTAATAGTGACATTATCTGGCTAGGTGTAATCTAGCCTTGTTTATGTGTTGTCAAATCACTAATTAAGTAGTGAT
ATATTTTAGGTTTATTGTCA

Downstream 100 bases:

>100_bases
GAAAAGCAACAAGCGTAAGTACAACGATAGAATGAAATTTGGTTTGTTTTTGATCTAATGAGTTAATTTGTAATCGAACA
AACTGAAAAAGGCACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKSRGPFCIRNAAADTFAMVVFCFISGMIVEVFISGMTFEQSLASRTLSIPVNIAIAWPYGVFRDWFLRNGAKLSQSSLM
KNLSDLVAYVLFQSPVYAGILLAVGASSDQIVTAVTSNAVISCGMGVLYGYFLDMCRKWFRVPGYYQQA

Sequences:

>Translated_149_residues
MKSRGPFCIRNAAADTFAMVVFCFISGMIVEVFISGMTFEQSLASRTLSIPVNIAIAWPYGVFRDWFLRNGAKLSQSSLM
KNLSDLVAYVLFQSPVYAGILLAVGASSDQIVTAVTSNAVISCGMGVLYGYFLDMCRKWFRVPGYYQQA
>Mature_149_residues
MKSRGPFCIRNAAADTFAMVVFCFISGMIVEVFISGMTFEQSLASRTLSIPVNIAIAWPYGVFRDWFLRNGAKLSQSSLM
KNLSDLVAYVLFQSPVYAGILLAVGASSDQIVTAVTSNAVISCGMGVLYGYFLDMCRKWFRVPGYYQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789025, Length=139, Percent_Identity=59.7122302158273, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010574
- ProDom:   PD090021 [H]

Pfam domain/function: PF06610 DUF1144 [H]

EC number: NA

Molecular weight: Translated: 16415; Mature: 16415

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRGPFCIRNAAADTFAMVVFCFISGMIVEVFISGMTFEQSLASRTLSIPVNIAIAWPY
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEECCEEEEEECCH
GVFRDWFLRNGAKLSQSSLMKNLSDLVAYVLFQSPVYAGILLAVGASSDQIVTAVTSNAV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCHH
ISCGMGVLYGYFLDMCRKWFRVPGYYQQA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSRGPFCIRNAAADTFAMVVFCFISGMIVEVFISGMTFEQSLASRTLSIPVNIAIAWPY
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEECCEEEEEECCH
GVFRDWFLRNGAKLSQSSLMKNLSDLVAYVLFQSPVYAGILLAVGASSDQIVTAVTSNAV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCHH
ISCGMGVLYGYFLDMCRKWFRVPGYYQQA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]