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The map label for this gene is mipA [H]

Identifier: 218709042

GI number: 218709042

Start: 1096647

End: 1097402

Strand: Direct

Name: mipA [H]

Synonym: VS_1048

Alternate gene names: 218709042

Gene position: 1096647-1097402 (Clockwise)

Preceding gene: 218709038

Following gene: 218709048

Centisome position: 33.24

GC content: 45.77

Gene sequence:

>756_bases
GTGAAGAATAATGGGTTAAAAATAGTGGCTATCAGTGTGGCGTTACTGGCTTCGACAGTAACGCATGCAAAAATATCGCA
GTGGTCATTGGGCGTTGCCGCCTCTTATTCTCCTGCTGTCTATAAAGAGACGCCGTCAAATCGTACGGTGATCCCCATGA
TTGGTTATGAAGGTGAGCATTTTTTCATGCGTGGATTCAGTGCGGGTTATCGCTTGCTACCTGCAGGTTCACCACAGAAT
ATTGTGTTTAGAGCGGTTTATGATCCAAGAACATTAAAGCCAAGTGACTCTGATAATGCTGATATCCAGAAGTTAGATGA
GCGTAAAGCGTCGGTGTTGGGAGGTGTAAGCTATCAAGTGATTACATTGGTCGGTATGTTTGAAGCGACAGCGGGCTCAG
ACTTAGGGTTTAGGCACAATGGCATCTATGCAGAAGCGGCATGGCGCCTACCAATTCGTCGCAATGGCTGGGCGATTACA
CCATCTATTGGTTACTCGTATAACAGTAAGCGTTTGAATAATCACCTGTACGGAGTGAGTTCATCGGAAGCGGCGAGAAC
CAATTTAGATGAATTTGACGCTGACTGGGATGGCCAATACTTTATCGGTTTAGGTGGTTATCTGCATGTGACGCCAAATG
TTCGAGTAACCGGCGGTGTGCGATATACCAACCTTGAAGGTGATATTGAAAATAGCCCAATACTTGAAAGTGGCATTAAC
ATGGCCGCTAACGTCGGTGTCGCTTATGTATTCTAG

Upstream 100 bases:

>100_bases
TGTGTATTAGATGTATAACTGAGCTCTATTGATTTTTTGGAATGAAGTACCATATAATGCGCTGCGTTATCCAATGTTGC
TCAATAAATAGGTAAATATA

Downstream 100 bases:

>100_bases
GTGCTTTGGCTTATCGCTTCATATATGAATATTAAAAAAGGGTTACTCATGATGAGTAACCCTTTTTTGAAATTTTATAA
GCCCACTTAAAGCTAATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKNNGLKIVAISVALLASTVTHAKISQWSLGVAASYSPAVYKETPSNRTVIPMIGYEGEHFFMRGFSAGYRLLPAGSPQN
IVFRAVYDPRTLKPSDSDNADIQKLDERKASVLGGVSYQVITLVGMFEATAGSDLGFRHNGIYAEAAWRLPIRRNGWAIT
PSIGYSYNSKRLNNHLYGVSSSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEGDIENSPILESGIN
MAANVGVAYVF

Sequences:

>Translated_251_residues
MKNNGLKIVAISVALLASTVTHAKISQWSLGVAASYSPAVYKETPSNRTVIPMIGYEGEHFFMRGFSAGYRLLPAGSPQN
IVFRAVYDPRTLKPSDSDNADIQKLDERKASVLGGVSYQVITLVGMFEATAGSDLGFRHNGIYAEAAWRLPIRRNGWAIT
PSIGYSYNSKRLNNHLYGVSSSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEGDIENSPILESGIN
MAANVGVAYVF
>Mature_251_residues
MKNNGLKIVAISVALLASTVTHAKISQWSLGVAASYSPAVYKETPSNRTVIPMIGYEGEHFFMRGFSAGYRLLPAGSPQN
IVFRAVYDPRTLKPSDSDNADIQKLDERKASVLGGVSYQVITLVGMFEATAGSDLGFRHNGIYAEAAWRLPIRRNGWAIT
PSIGYSYNSKRLNNHLYGVSSSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEGDIENSPILESGIN
MAANVGVAYVF

Specific function: May serve as a scaffold protein required for the formation of a complex with mrcB/ponB and mltA, this complex could play a role in enlargement and septation of the murein sacculus [H]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=247, Percent_Identity=29.5546558704453, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1790010, Length=240, Percent_Identity=25.8333333333333, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 27351; Mature: 27351

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNGLKIVAISVALLASTVTHAKISQWSLGVAASYSPAVYKETPSNRTVIPMIGYEGEH
CCCCCEEEEEEHHHHHHHHHHHHECCCEECEEEECCCCEEEEECCCCCEEEEEECCCCCE
FFMRGFSAGYRLLPAGSPQNIVFRAVYDPRTLKPSDSDNADIQKLDERKASVLGGVSYQV
EEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
ITLVGMFEATAGSDLGFRHNGIYAEAAWRLPIRRNGWAITPSIGYSYNSKRLNNHLYGVS
EEEEEHHHCCCCCCCCEECCCEEEEEEEECCEECCCEEEECCCCCCCCCHHHCCEEECCC
SSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEGDIENSPILESGIN
CCCHHHCCCHHCCCCCCCEEEEEECCEEEECCCEEEECCEEEEECCCCCCCCCCHHHCCC
MAANVGVAYVF
EEECCCEEEEC
>Mature Secondary Structure
MKNNGLKIVAISVALLASTVTHAKISQWSLGVAASYSPAVYKETPSNRTVIPMIGYEGEH
CCCCCEEEEEEHHHHHHHHHHHHECCCEECEEEECCCCEEEEECCCCCEEEEEECCCCCE
FFMRGFSAGYRLLPAGSPQNIVFRAVYDPRTLKPSDSDNADIQKLDERKASVLGGVSYQV
EEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
ITLVGMFEATAGSDLGFRHNGIYAEAAWRLPIRRNGWAITPSIGYSYNSKRLNNHLYGVS
EEEEEHHHCCCCCCCCEECCCEEEEEEEECCEECCCEEEECCCCCCCCCHHHCCEEECCC
SSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEGDIENSPILESGIN
CCCHHHCCCHHCCCCCCCEEEEEECCEEEECCCEEEECCEEEEECCCCCCCCCCHHHCCC
MAANVGVAYVF
EEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10037771; 10806384 [H]