Click here to switch to the map view.

The map label for this gene is 218708789

Identifier: 218708789

GI number: 218708789

Start: 810151

End: 810465

Strand: Direct

Name: 218708789

Synonym: VS_0788

Alternate gene names: NA

Gene position: 810151-810465 (Clockwise)

Preceding gene: 218708771

Following gene: 218708790

Centisome position: 24.56

GC content: 39.05

Gene sequence:

>315_bases
ATGAATGTTGAGGATACTCCAGTTGCTTTGAATCTTCAAAGTAAACAGGTGAAATCAGCGATTTATGAGTCTGCTGAGAA
CCGAGGTTGGTTGGTTTCAGAAATTAAGCCAGGCCTAATCCGTGCTGAACTGTATGTCCGTTCACATCATGCTGTGGTTG
ATATTCCATATAATGATAAGTTTTACTCTATTCTTTACGTCGAATCAGAGAATTTGAAGTACGACGATGGTGAAATACAC
CGTAATTACAACCGTTGGGTTAATAACTTGAACGTTGATATTAAACGCAAGCTTGCACAAATGGCTGCTATGTAG

Upstream 100 bases:

>100_bases
AAATAAACACGGGTAAGGAGTTTAAATGAAATTACTAAAAATAGCCGTTTCAATGTTATTTATACTCGTTCTTGCAGGCT
GTGGACGTGTCCAACCTGTA

Downstream 100 bases:

>100_bases
CTCTCTATTATTTTAAAGTTAGGTTTTTCGTGTCGGAATATAAATTAGATCCATTTAACGCATTAGAAGCAAAAACAGAA
GCGCAAAAATTGTCTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Caspase Domain Protein; Conserved Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNVEDTPVALNLQSKQVKSAIYESAENRGWLVSEIKPGLIRAELYVRSHHAVVDIPYNDKFYSILYVESENLKYDDGEIH
RNYNRWVNNLNVDIKRKLAQMAAM

Sequences:

>Translated_104_residues
MNVEDTPVALNLQSKQVKSAIYESAENRGWLVSEIKPGLIRAELYVRSHHAVVDIPYNDKFYSILYVESENLKYDDGEIH
RNYNRWVNNLNVDIKRKLAQMAAM
>Mature_104_residues
MNVEDTPVALNLQSKQVKSAIYESAENRGWLVSEIKPGLIRAELYVRSHHAVVDIPYNDKFYSILYVESENLKYDDGEIH
RNYNRWVNNLNVDIKRKLAQMAAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12112; Mature: 12112

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVEDTPVALNLQSKQVKSAIYESAENRGWLVSEIKPGLIRAELYVRSHHAVVDIPYNDK
CCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEECCCEEEECCCCCC
FYSILYVESENLKYDDGEIHRNYNRWVNNLNVDIKRKLAQMAAM
EEEEEEEECCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNVEDTPVALNLQSKQVKSAIYESAENRGWLVSEIKPGLIRAELYVRSHHAVVDIPYNDK
CCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEECCCEEEECCCCCC
FYSILYVESENLKYDDGEIHRNYNRWVNNLNVDIKRKLAQMAAM
EEEEEEEECCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA