| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fabG [H]
Identifier: 218708773
GI number: 218708773
Start: 795486
End: 796211
Strand: Reverse
Name: fabG [H]
Synonym: VS_0771
Alternate gene names: 218708773
Gene position: 796211-795486 (Counterclockwise)
Preceding gene: 218708774
Following gene: 218708772
Centisome position: 24.13
GC content: 50.14
Gene sequence:
>726_bases ATGAGCCGTCAGGTTTTAGTCACTGGTGCCAGTAAAGGCATTGGTAAAGCGATCGCTATTCAACTCGCGAAAGACGGTTT TGAAATCGCCGTTCATTACATGGGTGACAAGCAAGGTGCAGAAAATACTTTGAAGTCGATTACTGAACTGGGTGGCGCAG GGCGTCTGATCCAGTTTGATATTAGCAACCGCAACGAGTGTCGCGATACGCTTGAGTCAGATATTGCCGAACACGGCGCT TACTATGGCGTGGTGAATAATGCGGGCATTACACGCGACACAGCCTTCCCTGCCATGACTGAAGAAGAATGGGATGGCGT TATCCACACCAACCTCGACAGTTTCTACAATGTACTGCACCCGTGCGTAATGCCAATGGTTCAAAAGCGTAAAGGCGGTC GAATTGTTACTCTGGCGTCGGTATCTGGCATCATGGGAAACCGCGGTCAAACCAACTATGCCGCAGCAAAAGCGGGCGTG ATTGGCGCGACTAAGTCACTTGCTCTAGAACTAGCAAAACGCAAAATCACAGTAAACTGTGTGGCTCCGGGTTTAATCGA TACTGGCATGGTTGATGAGCATGTAAAAGAGCATGCGCTGCCTCAAGTTCCACTGCGCCGCATGGGCGAGCCAGAAGAAG TCGCCGGCCTAGTCAGCTACCTAATGTCGGATATTGCCGGCTACGTAACTCGCCAAGTGATTTCAGTTAATGGAGGCTTA GTATGA
Upstream 100 bases:
>100_bases CCCGAGTCGAAGACCAAGGCGAGTTAGTGGCTCAATGCCAACTCAACGTCTACGTGCCGACCGAACAAAAATTACAAGAA ATGAAAACTAGGAGCCCATC
Downstream 100 bases:
>100_bases CCCGCCGCGTTGTTGTAACTGGCATGTCAGGCGTTACCGCTTTTGGCAACGATTGGCAGCACATCGAGCCAAAACTAAAA GCGTGTGAAAATGCGACCCA
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSRQVLVTGASKGIGKAIAIQLAKDGFEIAVHYMGDKQGAENTLKSITELGGAGRLIQFDISNRNECRDTLESDIAEHGA YYGVVNNAGITRDTAFPAMTEEEWDGVIHTNLDSFYNVLHPCVMPMVQKRKGGRIVTLASVSGIMGNRGQTNYAAAKAGV IGATKSLALELAKRKITVNCVAPGLIDTGMVDEHVKEHALPQVPLRRMGEPEEVAGLVSYLMSDIAGYVTRQVISVNGGL V
Sequences:
>Translated_241_residues MSRQVLVTGASKGIGKAIAIQLAKDGFEIAVHYMGDKQGAENTLKSITELGGAGRLIQFDISNRNECRDTLESDIAEHGA YYGVVNNAGITRDTAFPAMTEEEWDGVIHTNLDSFYNVLHPCVMPMVQKRKGGRIVTLASVSGIMGNRGQTNYAAAKAGV IGATKSLALELAKRKITVNCVAPGLIDTGMVDEHVKEHALPQVPLRRMGEPEEVAGLVSYLMSDIAGYVTRQVISVNGGL V >Mature_240_residues SRQVLVTGASKGIGKAIAIQLAKDGFEIAVHYMGDKQGAENTLKSITELGGAGRLIQFDISNRNECRDTLESDIAEHGAY YGVVNNAGITRDTAFPAMTEEEWDGVIHTNLDSFYNVLHPCVMPMVQKRKGGRIVTLASVSGIMGNRGQTNYAAAKAGVI GATKSLALELAKRKITVNCVAPGLIDTGMVDEHVKEHALPQVPLRRMGEPEEVAGLVSYLMSDIAGYVTRQVISVNGGLV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=37.3493975903614, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=34.5833333333333, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=33.0612244897959, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=31.5789473684211, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=32.9268292682927, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI4504505, Length=227, Percent_Identity=33.920704845815, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=31.2, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI66933014, Length=166, Percent_Identity=30.7228915662651, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI142976729, Length=214, Percent_Identity=29.9065420560748, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=28.2178217821782, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=27.5720164609054, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=29.6703296703297, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI59889578, Length=202, Percent_Identity=30.1980198019802, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=27.6, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=26.5560165975104, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI40807363, Length=193, Percent_Identity=27.979274611399, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI7657478, Length=209, Percent_Identity=28.7081339712919, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=45.1882845188285, Blast_Score=181, Evalue=3e-47, Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=36.4754098360656, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=35.6275303643725, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=29.5081967213115, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=31.6205533596838, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=29.4605809128631, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787905, Length=238, Percent_Identity=30.672268907563, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=29.8387096774194, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=28.4, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=30.7053941908714, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=25.8196721311475, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1789057, Length=173, Percent_Identity=28.9017341040462, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=27.6923076923077, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787526, Length=227, Percent_Identity=25.9911894273128, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=30.4347826086957, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=38.8429752066116, Blast_Score=143, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=38.2716049382716, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17568967, Length=224, Percent_Identity=33.9285714285714, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=30.6772908366534, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=31.2757201646091, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=30.4, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562910, Length=255, Percent_Identity=30.1960784313725, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=31.7708333333333, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=29.2, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=30.7291666666667, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI193203115, Length=192, Percent_Identity=30.7291666666667, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=30.1204819277108, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=28.6290322580645, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=27.3092369477912, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=30, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=26.2357414448669, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17508651, Length=260, Percent_Identity=28.0769230769231, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=26.3565891472868, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17559104, Length=255, Percent_Identity=25.8823529411765, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=25.5639097744361, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567345, Length=206, Percent_Identity=25.7281553398058, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562906, Length=255, Percent_Identity=25.8823529411765, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=227, Percent_Identity=35.2422907488987, Blast_Score=118, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6324126, Length=214, Percent_Identity=26.6355140186916, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322227, Length=210, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=234, Percent_Identity=30.7692307692308, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=37.7593360995851, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=31.3008130081301, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=36.6935483870968, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=34.8178137651822, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=33.2, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=31.7269076305221, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=31.6872427983539, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI18859837, Length=230, Percent_Identity=29.1304347826087, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=30, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24640492, Length=192, Percent_Identity=29.6875, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24649181, Length=189, Percent_Identity=28.042328042328, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644337, Length=165, Percent_Identity=32.1212121212121, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR011285 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25771; Mature: 25640
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQVLVTGASKGIGKAIAIQLAKDGFEIAVHYMGDKQGAENTLKSITELGGAGRLIQFD CCCEEEEECCCCCCCHHEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE ISNRNECRDTLESDIAEHGAYYGVVNNAGITRDTAFPAMTEEEWDGVIHTNLDSFYNVLH CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEECCHHHHHHHHH PCVMPMVQKRKGGRIVTLASVSGIMGNRGQTNYAAAKAGVIGATKSLALELAKRKITVNC HHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHEEEEEE VAPGLIDTGMVDEHVKEHALPQVPLRRMGEPEEVAGLVSYLMSDIAGYVTRQVISVNGGL ECCCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC V C >Mature Secondary Structure SRQVLVTGASKGIGKAIAIQLAKDGFEIAVHYMGDKQGAENTLKSITELGGAGRLIQFD CCEEEEECCCCCCCHHEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE ISNRNECRDTLESDIAEHGAYYGVVNNAGITRDTAFPAMTEEEWDGVIHTNLDSFYNVLH CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEECCHHHHHHHHH PCVMPMVQKRKGGRIVTLASVSGIMGNRGQTNYAAAKAGVIGATKSLALELAKRKITVNC HHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHEEEEEE VAPGLIDTGMVDEHVKEHALPQVPLRRMGEPEEVAGLVSYLMSDIAGYVTRQVISVNGGL ECCCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]