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The map label for this gene is ybeD [C]

Identifier: 218708730

GI number: 218708730

Start: 744200

End: 744610

Strand: Reverse

Name: ybeD [C]

Synonym: VS_0709

Alternate gene names: 218708730

Gene position: 744610-744200 (Counterclockwise)

Preceding gene: 218708731

Following gene: 218708729

Centisome position: 22.57

GC content: 41.36

Gene sequence:

>411_bases
GTGCGGCTTTTGTTGATCTTGAGTTCGGTGATATTTACACGTAATATTCCGCATTATTACTCGTGTCTGTTGACCGAACA
CGCTTTTTATCGACATTTCGCCAATTTGCGAGAGTCTAGCCTTTTGGAGCTAATCATGAACATCAATTCTGATGCAAAAC
TAAAAGACCTCTTAGAGTTCCCTTGTTCATTCACTTACAAAGTTATGGGCTACGCTAAGCCAGAACTTACTGAACTAGTG
CTAGAAGTGATCCAGCGTCATGCTCCTGGTGACTACAGCCCAACTCTAAAACCGAGTGCGAAAGGTAACTACCACTCTGT
TTCTATCAATATTACTGCGACTTCAATTGAGCAAGTAGAAACGCTATATAAAGAACTGGGCGAAATCGAAATCGTTCGTA
TGGTTCTGTAA

Upstream 100 bases:

>100_bases
ATCAGCCAACGGTTTGTTCTACACAAAACCTAAGCTTGCTGTATAGCTAACCTAATGAGTAGGTTCATGATTTTCTCATT
AGCGAAACAAAAGCCGCCAT

Downstream 100 bases:

>100_bases
CTTTCGATTACGCATGAAAAACAGCGGCTTATTGCCGCTGTTTTTGTTTGAAACCCTCGCTCCCCTTACAAAGCATTCAA
CTTAATTTTCAATAAATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRLLLILSSVIFTRNIPHYYSCLLTEHAFYRHFANLRESSLLELIMNINSDAKLKDLLEFPCSFTYKVMGYAKPELTELV
LEVIQRHAPGDYSPTLKPSAKGNYHSVSINITATSIEQVETLYKELGEIEIVRMVL

Sequences:

>Translated_136_residues
MRLLLILSSVIFTRNIPHYYSCLLTEHAFYRHFANLRESSLLELIMNINSDAKLKDLLEFPCSFTYKVMGYAKPELTELV
LEVIQRHAPGDYSPTLKPSAKGNYHSVSINITATSIEQVETLYKELGEIEIVRMVL
>Mature_136_residues
MRLLLILSSVIFTRNIPHYYSCLLTEHAFYRHFANLRESSLLELIMNINSDAKLKDLLEFPCSFTYKVMGYAKPELTELV
LEVIQRHAPGDYSPTLKPSAKGNYHSVSINITATSIEQVETLYKELGEIEIVRMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=85, Percent_Identity=75.2941176470588, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 15609; Mature: 15609

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLILSSVIFTRNIPHYYSCLLTEHAFYRHFANLRESSLLELIMNINSDAKLKDLLEF
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PCSFTYKVMGYAKPELTELVLEVIQRHAPGDYSPTLKPSAKGNYHSVSINITATSIEQVE
CCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHH
TLYKELGEIEIVRMVL
HHHHHHCCHHHHHCCC
>Mature Secondary Structure
MRLLLILSSVIFTRNIPHYYSCLLTEHAFYRHFANLRESSLLELIMNINSDAKLKDLLEF
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PCSFTYKVMGYAKPELTELVLEVIQRHAPGDYSPTLKPSAKGNYHSVSINITATSIEQVE
CCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHH
TLYKELGEIEIVRMVL
HHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA