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The map label for this gene is 218708725

Identifier: 218708725

GI number: 218708725

Start: 739214

End: 739687

Strand: Direct

Name: 218708725

Synonym: VS_0704

Alternate gene names: NA

Gene position: 739214-739687 (Clockwise)

Preceding gene: 218708723

Following gene: 218708726

Centisome position: 22.41

GC content: 43.46

Gene sequence:

>474_bases
ATGAATAAGTCTGAGCTTCGCCAAATAATCATAGAGCAACTTGAATCCCGATTACGTATCGCACAATCTGCTACTCAACG
CGCTATTGATGCGGCGACCGATGAAGAGACAGTGCCTGAGCATAAGTACGATACATTGGCACTAGAAGCTTCGTATCTTG
CTCACGGTCAAGCAGTAAGAGTGCAAGAGTGTGAAGGTGACATTCAGTGTTATCGTAACTTAGTGCTGCGTGATAGTGAG
AAGATTACAGTGAGCAGCTATGTTGTGGTCATTGACGAGCATGATCAATATAAACACTTTTTCATGGGGCCGAGAGTCGG
TGGGCTTTCTGTTACGTGGAATAACAATGAAGTTGCTATCGTGACGGAAAATGCACCTTTTGGTCAGGCTCTTATGGGGA
AAGAAGTCGGTGATGAGATTGAGTTTAAGGTCGCAGATAAACAGTTTTGCTATGAAGTAATATCTATCGACTAA

Upstream 100 bases:

>100_bases
GGCGCCTATTGATGATTGCGTCGCTTGATGAATCAAATGTCTTGCACCTGATTGTACCTAATTCTATTCTGTAGCTCCTA
TACAAAAGCACCCCAATAGT

Downstream 100 bases:

>100_bases
CTGAGTAACGGATATATATAAAACGTTTCTCTGACAAAGAAGCATATACCAAGGGTATAGTAATCTGTCAGATTGATGAG
AGGATGTTATGAAAAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Elongation Factor; Transcriptional Elongation Factor

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNKSELRQIIIEQLESRLRIAQSATQRAIDAATDEETVPEHKYDTLALEASYLAHGQAVRVQECEGDIQCYRNLVLRDSE
KITVSSYVVVIDEHDQYKHFFMGPRVGGLSVTWNNNEVAIVTENAPFGQALMGKEVGDEIEFKVADKQFCYEVISID

Sequences:

>Translated_157_residues
MNKSELRQIIIEQLESRLRIAQSATQRAIDAATDEETVPEHKYDTLALEASYLAHGQAVRVQECEGDIQCYRNLVLRDSE
KITVSSYVVVIDEHDQYKHFFMGPRVGGLSVTWNNNEVAIVTENAPFGQALMGKEVGDEIEFKVADKQFCYEVISID
>Mature_157_residues
MNKSELRQIIIEQLESRLRIAQSATQRAIDAATDEETVPEHKYDTLALEASYLAHGQAVRVQECEGDIQCYRNLVLRDSE
KITVSSYVVVIDEHDQYKHFFMGPRVGGLSVTWNNNEVAIVTENAPFGQALMGKEVGDEIEFKVADKQFCYEVISID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17769; Mature: 17769

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSELRQIIIEQLESRLRIAQSATQRAIDAATDEETVPEHKYDTLALEASYLAHGQAVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCCEEE
VQECEGDIQCYRNLVLRDSEKITVSSYVVVIDEHDQYKHFFMGPRVGGLSVTWNNNEVAI
EECCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCEEEE
VTENAPFGQALMGKEVGDEIEFKVADKQFCYEVISID
EECCCCCCHHHHCCCCCCCEEEEECCHHHHHHEECCC
>Mature Secondary Structure
MNKSELRQIIIEQLESRLRIAQSATQRAIDAATDEETVPEHKYDTLALEASYLAHGQAVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCCEEE
VQECEGDIQCYRNLVLRDSEKITVSSYVVVIDEHDQYKHFFMGPRVGGLSVTWNNNEVAI
EECCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCEEEE
VTENAPFGQALMGKEVGDEIEFKVADKQFCYEVISID
EECCCCCCHHHHCCCCCCCEEEEECCHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA