| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ampG4 [H]
Identifier: 218708709
GI number: 218708709
Start: 722376
End: 723734
Strand: Reverse
Name: ampG4 [H]
Synonym: VS_0688
Alternate gene names: 218708709
Gene position: 723734-722376 (Counterclockwise)
Preceding gene: 218708710
Following gene: 218708707
Centisome position: 21.94
GC content: 44.67
Gene sequence:
>1359_bases ATGTCATCAGGCACCCCCTCTCTTTCTTGGATGCAAACTTTCCGCAGCTACCTAGATAAACGTCTACTTTGGGTGTTTAT GCTCGGTTGTTCGAGTGGCTTCCCATGGGTTCTGATTGGATCCAACATGTCTGGTTGGCTAAAAGATGCCGGTTTAACTC GTGCTGCGATCGGTTATTTCGGCAGTGTGTTTGCTGTCTATGCTATTAATTTTTTATGGGCACCGTTGGTAGACCGAGTC AAACTGCCAGTTTTACACGCGATATTAGGCCAACGACGCAGTTGGATATTCTTGTGCCAAAGCTTGGTATTGATCTGTAC CCTGTTCATTGCTGGAGTAAACCCAGCCAATGACTTGATGTTCACCTCTATGCTTGCTCTCGGAATAGCTATCGCCTCAG CAACTCAAGATGTCGCAATAGATGCCTTCCGTATTGATTCATTTCCAAAATCGGAAGCATCAAAGTTGCCACAAGCATCC GCAATGGCTGTGATGGGATGGTGGACTGGCTATTCTCTTCCAGGTTATCTTGCTTTTATCAATGCTGACTCAATCGGTTG GAATGGTGTGTATTATGGCATGGCAGGTGTGGTTGTCGTGTTAATGCTGTTTACTCTTTTTGTCGGAGAACCCAATACAC AACGTGAAGCGTTACAAGAGCAAGCACAGCAACGTCACAACAGAGTTGTGGGTTCAAAAGTCGTCGCTTGGTTCAGCGTT ACAGTGCTAGAACCGTTTTATGATTTCTTCAAACGAAACGGAGTTCAAGTTGCCATCACCCTTCTACTGTTTGTGTTCCT ATTTAAGATAGGTGAAGCCTTCTTGGGTAGAATGTCTATCACCTTCTATAAAGAGATAGGCTTTAGCAATGAACAGATTG GCCACTATTCTAAGTTAATCGGTTGGGGCGCGACGATATTCTTCACCTTGCTCGGCAGTATCTTCAATGTGAAATTCGGT ATTGTACGCGGACTAATGATTGGTGGCATCGCAATGGCAGCCAGCAACCTAATGTTTGCGTGGATCGCTCAGGCAGGCCC TAGTGAAACTCTGTTCTTGGCAACTATCATTGTCGACAACTTCACAACCGCCTTTTCGACGGTAGCATTTGTCTCTTTCT TAACCTTACTGACTGGCCAAGCTTTCTCAGCGACGCAATATGCCTTATTAGCATCCTTAGGCAATTTCGGTAGAACAACA CTGGCTTCATTCAGTGGCGAGCTCGTCGATTACCTCAATGATTGGTCAACCTTCTTTATACTGACGTCATTAATGGTGAT TCCGAGTTTGATCATGCTCTATTCGTTACGCCACTTTTTCACTGATTTATTAGAAAAAGCGAAAAACAACCACGAATAA
Upstream 100 bases:
>100_bases CATTCCTGTCGACCCAATCGTCATCACTAAAGTGACCCTTCTTAAGTAATCCAATGTAACGCCCTTATTCTTAAGGGCGT TTTCTATACAAGGACGCCCC
Downstream 100 bases:
>100_bases AAGAAAAAAAAGCAAAAGAGAAGAGGGGAGCATTGAGCTACCCTCTTCTCTTTTCTATTTTCTATTTGCAGACGCTTAAC GGATTAATCTGTGGTTTCAC
Product: putative AmpG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSSGTPSLSWMQTFRSYLDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFLWAPLVDRV KLPVLHAILGQRRSWIFLCQSLVLICTLFIAGVNPANDLMFTSMLALGIAIASATQDVAIDAFRIDSFPKSEASKLPQAS AMAVMGWWTGYSLPGYLAFINADSIGWNGVYYGMAGVVVVLMLFTLFVGEPNTQREALQEQAQQRHNRVVGSKVVAWFSV TVLEPFYDFFKRNGVQVAITLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGHYSKLIGWGATIFFTLLGSIFNVKFG IVRGLMIGGIAMAASNLMFAWIAQAGPSETLFLATIIVDNFTTAFSTVAFVSFLTLLTGQAFSATQYALLASLGNFGRTT LASFSGELVDYLNDWSTFFILTSLMVIPSLIMLYSLRHFFTDLLEKAKNNHE
Sequences:
>Translated_452_residues MSSGTPSLSWMQTFRSYLDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFLWAPLVDRV KLPVLHAILGQRRSWIFLCQSLVLICTLFIAGVNPANDLMFTSMLALGIAIASATQDVAIDAFRIDSFPKSEASKLPQAS AMAVMGWWTGYSLPGYLAFINADSIGWNGVYYGMAGVVVVLMLFTLFVGEPNTQREALQEQAQQRHNRVVGSKVVAWFSV TVLEPFYDFFKRNGVQVAITLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGHYSKLIGWGATIFFTLLGSIFNVKFG IVRGLMIGGIAMAASNLMFAWIAQAGPSETLFLATIIVDNFTTAFSTVAFVSFLTLLTGQAFSATQYALLASLGNFGRTT LASFSGELVDYLNDWSTFFILTSLMVIPSLIMLYSLRHFFTDLLEKAKNNHE >Mature_451_residues SSGTPSLSWMQTFRSYLDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFLWAPLVDRVK LPVLHAILGQRRSWIFLCQSLVLICTLFIAGVNPANDLMFTSMLALGIAIASATQDVAIDAFRIDSFPKSEASKLPQASA MAVMGWWTGYSLPGYLAFINADSIGWNGVYYGMAGVVVVLMLFTLFVGEPNTQREALQEQAQQRHNRVVGSKVVAWFSVT VLEPFYDFFKRNGVQVAITLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGHYSKLIGWGATIFFTLLGSIFNVKFGI VRGLMIGGIAMAASNLMFAWIAQAGPSETLFLATIIVDNFTTAFSTVAFVSFLTLLTGQAFSATQYALLASLGNFGRTTL ASFSGELVDYLNDWSTFFILTSLMVIPSLIMLYSLRHFFTDLLEKAKNNHE
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=429, Percent_Identity=30.5361305361305, Blast_Score=188, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49980; Mature: 49849
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGTPSLSWMQTFRSYLDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHH GSVFAVYAINFLWAPLVDRVKLPVLHAILGQRRSWIFLCQSLVLICTLFIAGVNPANDLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH FTSMLALGIAIASATQDVAIDAFRIDSFPKSEASKLPQASAMAVMGWWTGYSLPGYLAFI HHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCEEEEE NADSIGWNGVYYGMAGVVVVLMLFTLFVGEPNTQREALQEQAQQRHNRVVGSKVVAWFSV ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVLEPFYDFFKRNGVQVAITLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGHYSKLI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GWGATIFFTLLGSIFNVKFGIVRGLMIGGIAMAASNLMFAWIAQAGPSETLFLATIIVDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FTTAFSTVAFVSFLTLLTGQAFSATQYALLASLGNFGRTTLASFSGELVDYLNDWSTFFI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LTSLMVIPSLIMLYSLRHFFTDLLEKAKNNHE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSGTPSLSWMQTFRSYLDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHH GSVFAVYAINFLWAPLVDRVKLPVLHAILGQRRSWIFLCQSLVLICTLFIAGVNPANDLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH FTSMLALGIAIASATQDVAIDAFRIDSFPKSEASKLPQASAMAVMGWWTGYSLPGYLAFI HHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCEEEEE NADSIGWNGVYYGMAGVVVVLMLFTLFVGEPNTQREALQEQAQQRHNRVVGSKVVAWFSV ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVLEPFYDFFKRNGVQVAITLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGHYSKLI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GWGATIFFTLLGSIFNVKFGIVRGLMIGGIAMAASNLMFAWIAQAGPSETLFLATIIVDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FTTAFSTVAFVSFLTLLTGQAFSATQYALLASLGNFGRTTLASFSGELVDYLNDWSTFFI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LTSLMVIPSLIMLYSLRHFFTDLLEKAKNNHE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]