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The map label for this gene is 218708674

Identifier: 218708674

GI number: 218708674

Start: 680387

End: 680869

Strand: Reverse

Name: 218708674

Synonym: VS_0653

Alternate gene names: NA

Gene position: 680869-680387 (Counterclockwise)

Preceding gene: 218708683

Following gene: 218708669

Centisome position: 20.64

GC content: 42.44

Gene sequence:

>483_bases
ATGCTACCACCCGAGAAAAATGGACAGGGTTATGAAAGGAAACTACTCGTGAAGATTCGAATAAAAAGATGTAACAACAA
CAATTTAAGTATGAAAGGAATGACACTGATCGAAGTATTGATCGCTGTTGCCATTGTAGGAGTACTCAGTGCAATAGCTT
ATCCAAGCTACACAAACCATGTTTTAAAATCGCATCGAATGACAGCGATAGGAGATATGGCAAAAATTCAACTTGAACTT
GAGAGTGCTTACGCCGGAAATTATGCCACAGCTGCTGGAAACATAGTTTCGGGAGGGACGTGCTCGTTTTGCGATACCGA
TACAAGCAGGTACACACTAACAATTTCGGCTAGCAGTACCTCATACTCCATTCAAGCAAAACCACACGCACCACAGACAA
ATGATGACTGCTTAGACTCACCGACTGATATTCTGGAGTTACATCACTCAGGTGTTTCAGAGCCTCAAGCGTGTTGGAAG
TAA

Upstream 100 bases:

>100_bases
GTATCGACACCGTTATTAACAGCTCTAATAAAGTAAACCCGCGAGTCATTTCCCAAATTCCTATGTAATCAGGTGCGTAA
GCATATTTAATCTTGCACCG

Downstream 100 bases:

>100_bases
CAAGAGGAGACACTAAAGCCTCTAGGGGGTGATCTGAAAAATTTCGATTATTTTTGCTATGAGCTTCTTTTATACCAATC
AAAAAACACAAATCTATAGA

Product: putative fimbrial assembly protein PilE

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilE; Type IV Pilus Assembly Protein PilE; Type IV Pilin; Fimbrial Protein Pilin

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLPPEKNGQGYERKLLVKIRIKRCNNNNLSMKGMTLIEVLIAVAIVGVLSAIAYPSYTNHVLKSHRMTAIGDMAKIQLEL
ESAYAGNYATAAGNIVSGGTCSFCDTDTSRYTLTISASSTSYSIQAKPHAPQTNDDCLDSPTDILELHHSGVSEPQACWK

Sequences:

>Translated_160_residues
MLPPEKNGQGYERKLLVKIRIKRCNNNNLSMKGMTLIEVLIAVAIVGVLSAIAYPSYTNHVLKSHRMTAIGDMAKIQLEL
ESAYAGNYATAAGNIVSGGTCSFCDTDTSRYTLTISASSTSYSIQAKPHAPQTNDDCLDSPTDILELHHSGVSEPQACWK
>Mature_160_residues
MLPPEKNGQGYERKLLVKIRIKRCNNNNLSMKGMTLIEVLIAVAIVGVLSAIAYPSYTNHVLKSHRMTAIGDMAKIQLEL
ESAYAGNYATAAGNIVSGGTCSFCDTDTSRYTLTISASSTSYSIQAKPHAPQTNDDCLDSPTDILELHHSGVSEPQACWK

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17321; Mature: 17321

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPEKNGQGYERKLLVKIRIKRCNNNNLSMKGMTLIEVLIAVAIVGVLSAIAYPSYTNH
CCCCCCCCCCCCEEEEEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VLKSHRMTAIGDMAKIQLELESAYAGNYATAAGNIVSGGTCSFCDTDTSRYTLTISASST
HHHHCCCHHHCCEEEEEEEEECCCCCCEECCCCCEECCCCCCCCCCCCCEEEEEEEECCC
SYSIQAKPHAPQTNDDCLDSPTDILELHHSGVSEPQACWK
EEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCC
>Mature Secondary Structure
MLPPEKNGQGYERKLLVKIRIKRCNNNNLSMKGMTLIEVLIAVAIVGVLSAIAYPSYTNH
CCCCCCCCCCCCEEEEEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VLKSHRMTAIGDMAKIQLELESAYAGNYATAAGNIVSGGTCSFCDTDTSRYTLTISASST
HHHHCCCHHHCCEEEEEEEEECCCCCCEECCCCCEECCCCCCCCCCCCCEEEEEEEECCC
SYSIQAKPHAPQTNDDCLDSPTDILELHHSGVSEPQACWK
EEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA