Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708611
Identifier: 218708611
GI number: 218708611
Start: 613634
End: 614161
Strand: Reverse
Name: 218708611
Synonym: VS_0589
Alternate gene names: NA
Gene position: 614161-613634 (Counterclockwise)
Preceding gene: 218708613
Following gene: 218708606
Centisome position: 18.61
GC content: 43.37
Gene sequence:
>528_bases ATGCTAAGGAGAGCGCAAAATTACCTCGGTGGTACCATGAAATTTAAAACACTGCTTTTAGCTTCAGCTTTATTCTCAAC CTCTGCACTTTCAAATGGTCTTCACTTATCTCCTGAACTAAAGATTGGTTCTTATCATGGCTTTGGAATACAAGCAGGCA TTACTGATGTGGCGAATCTAGGTGCGGTTTACCTGAGCTATTCTCACCTATGGTATGACAGCGATCGATACGATGAGACT GTCGATGCATACCGCGTTGGTATTCAAAATATGTTTGGAAGCAACCAGAACCACGGCTTTCAGGCGGAGATTGGTGTAGC GAGTTATGACGGAACAAAGACGCGCAACGGCGAAATTGAAGAGAAGACAGCACATGGATTAAGTCTTGGTGGAGCCTACG TTTACCAAGCAACACCAGTGCTTGGGCTACGAGCTGGTGTTGATATGAATATTTTTGATCACAATAAGACCTTCGTGCCT TACGACACAACAATCAACCTTAACCTTGGTGCAATTATTCGATTCTAA
Upstream 100 bases:
>100_bases TCACAGAGATAACCAATGCGAATTAGCCTGCTCTTTCAAAGCCCATATAATGATCACCGTTAGCCAGTGATTTCACTGGG TTCACGCATGGATCGACCTA
Downstream 100 bases:
>100_bases AGTTAATACCTACTTCAGTGCGTCATCTAGGCTTTGATCACCAAGGTGGCGTACATCTTTACCCTTCACAAAGTAAATAA TGTATTCACAGATATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANLGAVYLSYSHLWYDSDRYDET VDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIEEKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVP YDTTINLNLGAIIRF
Sequences:
>Translated_175_residues MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANLGAVYLSYSHLWYDSDRYDET VDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIEEKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVP YDTTINLNLGAIIRF >Mature_175_residues MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANLGAVYLSYSHLWYDSDRYDET VDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIEEKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVP YDTTINLNLGAIIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19152; Mature: 19152
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANL CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEECCCHHHHHH GAVYLSYSHLWYDSDRYDETVDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIE HEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCC EKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVPYDTTINLNLGAIIRF HHHCCCEECCCEEEEECCCEEEEECCCEEEEEECCCEEECCCCEEEEECCEEEEC >Mature Secondary Structure MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANL CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEECCCHHHHHH GAVYLSYSHLWYDSDRYDETVDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIE HEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCC EKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVPYDTTINLNLGAIIRF HHHCCCEECCCEEEEECCCEEEEECCCEEEEEECCCEEECCCCEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA