Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708611

Identifier: 218708611

GI number: 218708611

Start: 613634

End: 614161

Strand: Reverse

Name: 218708611

Synonym: VS_0589

Alternate gene names: NA

Gene position: 614161-613634 (Counterclockwise)

Preceding gene: 218708613

Following gene: 218708606

Centisome position: 18.61

GC content: 43.37

Gene sequence:

>528_bases
ATGCTAAGGAGAGCGCAAAATTACCTCGGTGGTACCATGAAATTTAAAACACTGCTTTTAGCTTCAGCTTTATTCTCAAC
CTCTGCACTTTCAAATGGTCTTCACTTATCTCCTGAACTAAAGATTGGTTCTTATCATGGCTTTGGAATACAAGCAGGCA
TTACTGATGTGGCGAATCTAGGTGCGGTTTACCTGAGCTATTCTCACCTATGGTATGACAGCGATCGATACGATGAGACT
GTCGATGCATACCGCGTTGGTATTCAAAATATGTTTGGAAGCAACCAGAACCACGGCTTTCAGGCGGAGATTGGTGTAGC
GAGTTATGACGGAACAAAGACGCGCAACGGCGAAATTGAAGAGAAGACAGCACATGGATTAAGTCTTGGTGGAGCCTACG
TTTACCAAGCAACACCAGTGCTTGGGCTACGAGCTGGTGTTGATATGAATATTTTTGATCACAATAAGACCTTCGTGCCT
TACGACACAACAATCAACCTTAACCTTGGTGCAATTATTCGATTCTAA

Upstream 100 bases:

>100_bases
TCACAGAGATAACCAATGCGAATTAGCCTGCTCTTTCAAAGCCCATATAATGATCACCGTTAGCCAGTGATTTCACTGGG
TTCACGCATGGATCGACCTA

Downstream 100 bases:

>100_bases
AGTTAATACCTACTTCAGTGCGTCATCTAGGCTTTGATCACCAAGGTGGCGTACATCTTTACCCTTCACAAAGTAAATAA
TGTATTCACAGATATTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANLGAVYLSYSHLWYDSDRYDET
VDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIEEKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVP
YDTTINLNLGAIIRF

Sequences:

>Translated_175_residues
MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANLGAVYLSYSHLWYDSDRYDET
VDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIEEKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVP
YDTTINLNLGAIIRF
>Mature_175_residues
MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANLGAVYLSYSHLWYDSDRYDET
VDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIEEKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVP
YDTTINLNLGAIIRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19152; Mature: 19152

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANL
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEECCCHHHHHH
GAVYLSYSHLWYDSDRYDETVDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIE
HEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCC
EKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVPYDTTINLNLGAIIRF
HHHCCCEECCCEEEEECCCEEEEECCCEEEEEECCCEEECCCCEEEEECCEEEEC
>Mature Secondary Structure
MLRRAQNYLGGTMKFKTLLLASALFSTSALSNGLHLSPELKIGSYHGFGIQAGITDVANL
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEECCCHHHHHH
GAVYLSYSHLWYDSDRYDETVDAYRVGIQNMFGSNQNHGFQAEIGVASYDGTKTRNGEIE
HEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCC
EKTAHGLSLGGAYVYQATPVLGLRAGVDMNIFDHNKTFVPYDTTINLNLGAIIRF
HHHCCCEECCCEEEEECCCEEEEECCCEEEEEECCCEEECCCCEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA