Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708564
Identifier: 218708564
GI number: 218708564
Start: 549562
End: 550782
Strand: Reverse
Name: 218708564
Synonym: VS_0530
Alternate gene names: NA
Gene position: 550782-549562 (Counterclockwise)
Preceding gene: 218708567
Following gene: 218708556
Centisome position: 16.69
GC content: 44.23
Gene sequence:
>1221_bases TTGTTCTCTAACATCACGCTCAGATTAAACAAACAGACCAAACACAGACTAAAACGGTCCAATGGAGAAAACATTATGAA CCAAGCTACTACTGCAGCAGCGCCTATCTCGAGCACAACTCGTTGGCTACGCTGGGCTAACTTGGCATTCATGCTTTACC TACTATTACTTTCAGTTTCAATGGTTGGTACAGGCTTCAAATGGGCAACAGGCGAGCAAGCAAAAGTTCTTTTCGAATTT GCTTCACACCCAGTTGCAGGCTTAATGATTGGTTTAGTAGCAACAGCCCTTATTCAATCATCAAGTACAGTTACTTCAAT TATCGTTGGCCTTGTGGCAGGTGGTTTACCTGTTGAGCTAGCAATCCCTATGATCATGGGTGCGAACATTGGTACTACGG TAACCAATACGCTAGTTAGCCTTGGTCATGTTCGTTGTAAAGATGAGTTCAAACGTGCATTCGCAAGTGCGACGATTCAC GACTTCTTTAACCTATTAGCCGTTGCTATCTTCCTACCACTAGAGATGGCGTTTGGTATTCTAGAGAAAATTTCTCACTG GTTAGTATCACCGATGCTAGCAACAGGTGATATGAGCATGGGTGGTCTTAACTTCATCAAGCCAATCACTAAGCCTGTTG TAAGTGCGATTAAAGAACCACTATCAACGTTTGGCGACACTGTTGGTGGGGTTATGCTTATCGTTCTAGGTATCGCGACT ATCTTCGTAGCTATCACGGTAATGGGTAAGCTAATGAAGAGCCTAATGGTTGGCCGTGCTCGTGAGATTCTAAAGAATGC AATTGGTCGAGGCCCTATCCACGGTATCGCTTCTGGCTCTATCGTTACTATCCTTGTTCAGTCTTCTTCAACGACAACAA GTTTGATGGTTCCACTAGTTGGTTCAGGTGTTCTTAAAGTACGTGACGTTTACCCATTCACTTTAGGTGCAAACATCGGT ACGTGTATTACCGCGCTATTAGCAGCGACAGCAGTATCTGGTGAGTTTGCAGTATTCGCACTACAGATTGCTCTAGTACA CTTGGTGTTCAACATCATGGCAACGGTATTCATCTTTGGTATTCCGTTCCTACGTGAACTGCCAGTGAAAGCCGCTGATA TCATTTCAGACATGGCAGTGAAAAACAAAGCTGTAGTGGCAGGTTATCTTGTTGCGGTATTCCTTGTACTGCCTGGTAGC GTGTTAGCACTGACAGCTTAA
Upstream 100 bases:
>100_bases ACAACAAGTTAAACCACCACCATTTCAAGACCAAATATTTAAAGAGCAAATCATCACAAAAAAGTCTCACCTAAACCAAA ATGTAATATTACTGAAATAT
Downstream 100 bases:
>100_bases TAGCAAAACAAACATCGCTTATAGCAAAGCCCGCAACCTCCTAGGTTGCGGGCTTTTTCTTTTCTGAAAGGCAGATGTGG GAAACAAAAAGAAGATTGGA
Product: NptA protein
Products: NA
Alternate protein names: Na/Pi-Cotransporter II-Related Protein; Na+/Pi-Cotransporter; Sodium-Dependent Phosphate Transporter; Na+/Picotransporter; Na/Pi-Cotransporter Family Protein/PhoU Family Protein; Na/Pi-Cotransporter Family Protein; Sodium-Dependent Phosphate Pump NptA; Na+/Phosphate Symporter; Na/Pi Cotransporter Family Protein; Na+/H+ Antiporter; Na+/Pi-Cotransporter Protein; Sodium Dependent Phosphate Pump; Sodium Phosphate Symporter Protein
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MFSNITLRLNKQTKHRLKRSNGENIMNQATTAAAPISSTTRWLRWANLAFMLYLLLLSVSMVGTGFKWATGEQAKVLFEF ASHPVAGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVELAIPMIMGANIGTTVTNTLVSLGHVRCKDEFKRAFASATIH DFFNLLAVAIFLPLEMAFGILEKISHWLVSPMLATGDMSMGGLNFIKPITKPVVSAIKEPLSTFGDTVGGVMLIVLGIAT IFVAITVMGKLMKSLMVGRAREILKNAIGRGPIHGIASGSIVTILVQSSSTTTSLMVPLVGSGVLKVRDVYPFTLGANIG TCITALLAATAVSGEFAVFALQIALVHLVFNIMATVFIFGIPFLRELPVKAADIISDMAVKNKAVVAGYLVAVFLVLPGS VLALTA
Sequences:
>Translated_406_residues MFSNITLRLNKQTKHRLKRSNGENIMNQATTAAAPISSTTRWLRWANLAFMLYLLLLSVSMVGTGFKWATGEQAKVLFEF ASHPVAGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVELAIPMIMGANIGTTVTNTLVSLGHVRCKDEFKRAFASATIH DFFNLLAVAIFLPLEMAFGILEKISHWLVSPMLATGDMSMGGLNFIKPITKPVVSAIKEPLSTFGDTVGGVMLIVLGIAT IFVAITVMGKLMKSLMVGRAREILKNAIGRGPIHGIASGSIVTILVQSSSTTTSLMVPLVGSGVLKVRDVYPFTLGANIG TCITALLAATAVSGEFAVFALQIALVHLVFNIMATVFIFGIPFLRELPVKAADIISDMAVKNKAVVAGYLVAVFLVLPGS VLALTA >Mature_406_residues MFSNITLRLNKQTKHRLKRSNGENIMNQATTAAAPISSTTRWLRWANLAFMLYLLLLSVSMVGTGFKWATGEQAKVLFEF ASHPVAGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVELAIPMIMGANIGTTVTNTLVSLGHVRCKDEFKRAFASATIH DFFNLLAVAIFLPLEMAFGILEKISHWLVSPMLATGDMSMGGLNFIKPITKPVVSAIKEPLSTFGDTVGGVMLIVLGIAT IFVAITVMGKLMKSLMVGRAREILKNAIGRGPIHGIASGSIVTILVQSSSTTTSLMVPLVGSGVLKVRDVYPFTLGANIG TCITALLAATAVSGEFAVFALQIALVHLVFNIMATVFIFGIPFLRELPVKAADIISDMAVKNKAVVAGYLVAVFLVLPGS VLALTA
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156627569, Length=405, Percent_Identity=33.5802469135802, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI293597525, Length=412, Percent_Identity=30.0970873786408, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI293597523, Length=412, Percent_Identity=30.0970873786408, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI25014088, Length=412, Percent_Identity=30.0970873786408, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI262399385, Length=170, Percent_Identity=45.2941176470588, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI295789160, Length=178, Percent_Identity=43.2584269662921, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI295789158, Length=178, Percent_Identity=43.2584269662921, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI110611906, Length=178, Percent_Identity=43.2584269662921, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI25147712, Length=363, Percent_Identity=26.4462809917355, Blast_Score=147, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42930; Mature: 42930
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNITLRLNKQTKHRLKRSNGENIMNQATTAAAPISSTTRWLRWANLAFMLYLLLLSVS CCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MVGTGFKWATGEQAKVLFEFASHPVAGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVEL HHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH AIPMIMGANIGTTVTNTLVSLGHVRCKDEFKRAFASATIHDFFNLLAVAIFLPLEMAFGI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKISHWLVSPMLATGDMSMGGLNFIKPITKPVVSAIKEPLSTFGDTVGGVMLIVLGIAT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFVAITVMGKLMKSLMVGRAREILKNAIGRGPIHGIASGSIVTILVQSSSTTTSLMVPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH GSGVLKVRDVYPFTLGANIGTCITALLAATAVSGEFAVFALQIALVHLVFNIMATVFIFG CCCCEEEEEECCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IPFLRELPVKAADIISDMAVKNKAVVAGYLVAVFLVLPGSVLALTA HHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MFSNITLRLNKQTKHRLKRSNGENIMNQATTAAAPISSTTRWLRWANLAFMLYLLLLSVS CCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MVGTGFKWATGEQAKVLFEFASHPVAGLMIGLVATALIQSSSTVTSIIVGLVAGGLPVEL HHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH AIPMIMGANIGTTVTNTLVSLGHVRCKDEFKRAFASATIHDFFNLLAVAIFLPLEMAFGI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKISHWLVSPMLATGDMSMGGLNFIKPITKPVVSAIKEPLSTFGDTVGGVMLIVLGIAT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFVAITVMGKLMKSLMVGRAREILKNAIGRGPIHGIASGSIVTILVQSSSTTTSLMVPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH GSGVLKVRDVYPFTLGANIGTCITALLAATAVSGEFAVFALQIALVHLVFNIMATVFIFG CCCCEEEEEECCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IPFLRELPVKAADIISDMAVKNKAVVAGYLVAVFLVLPGSVLALTA HHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA