Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708549
Identifier: 218708549
GI number: 218708549
Start: 534258
End: 534419
Strand: Reverse
Name: 218708549
Synonym: VS_0515
Alternate gene names: NA
Gene position: 534419-534258 (Counterclockwise)
Preceding gene: 218708556
Following gene: 218708545
Centisome position: 16.2
GC content: 38.27
Gene sequence:
>162_bases TTGTTGGATTTGGCACTAAATGATGAACCTCATTCAGTGAACGATAACGCTATTTGGCTTCAACTATTTCGCTTCGATAT GATCAATCATCAACTGCAACGATTGATTGCCACGAAACTCGTTAATATCAAGCTTAAACGCAAGATGTACCGTTTTCACT GA
Upstream 100 bases:
>100_bases AAGATTCAATAACTTAATCGGATATAAAATTGACGGGCAGAAAAAACACGCAAAATTTGTAAGGAAAGGAAGGGAAACAA GCCCTGTTTTTGAACAGAGC
Downstream 100 bases:
>100_bases GGCATCAGGCCAGCGACGTAGGTCAACATTAAAGGCAATACCATCAATCATCACATTGGTCGGGTGGCCTTTATACAATG GCTCAAGCATTAACTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MLDLALNDEPHSVNDNAIWLQLFRFDMINHQLQRLIATKLVNIKLKRKMYRFH
Sequences:
>Translated_53_residues MLDLALNDEPHSVNDNAIWLQLFRFDMINHQLQRLIATKLVNIKLKRKMYRFH >Mature_53_residues MLDLALNDEPHSVNDNAIWLQLFRFDMINHQLQRLIATKLVNIKLKRKMYRFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6464; Mature: 6464
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLALNDEPHSVNDNAIWLQLFRFDMINHQLQRLIATKLVNIKLKRKMYRFH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDLALNDEPHSVNDNAIWLQLFRFDMINHQLQRLIATKLVNIKLKRKMYRFH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA