BacMap

Definition	Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession	NC_011753
Length	3,299,303

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The map label for this gene is srmB [H]

Identifier: 218708540

GI number: 218708540

Start: 525485

End: 526750

Strand: Reverse

Name: srmB [H]

Synonym: VS_0506

Alternate gene names: 218708540

Gene position: 526750-525485 (Counterclockwise)

Preceding gene: 218708541

Following gene: 218708537

Centisome position: 15.97

GC content: 47.08

Gene sequence:

>1266_bases
GTGATCAGAACCTTTGCAGAACTCGATCTAAACCAAGAGCTGCTTAAAGCAATTGACGAAATGGGCTACGAACGCCCAAC
ACAGATACAAGCTGAAGCAATCCCACAAGCGTTAGATGGAAGAGACGTTTTGGCTTCTGCGCCAACAGGTACTGGTAAAA
CAGCATCATTTGTATTGCCAGCACTGCAATACCTACTGGATTTCCCTCGTAAGAAATCTGGCCCGGCACGTATGCTTATC
CTGACGCCAACGCGTGAGCTAGCAATGCAGATCACCGAACAAGCACGTGAGCTTGCTAAATACACCAGCCTAAATATCTT
TACGATCACGGGCGGTGTGATGTACCAAGAGCACGCAGATATCTTAAGCACGACTCAAGATATCGTAGTCGCAACACCTG
GTCGTCTGATGGAATACATTGAAGGCGAGCGTTTTGACTGCCGTGCGATTGAATGGCTGGTTCTCGATGAAGCTGACCGT
ATGCTAGACATGGGCTTTGGTCCTGTTGTTGACCGTCTGTCTGCAGAGTGTCGCTGGCGTAAACAAACTTTACTTTTCTC
AGCAACGCTAGAAGGTAAAGGTATTGAAGGTTTCACTGAAGACCTTCTGAAAAACCCAGCAGAGATCGATGCAAAATCGT
CATTGCGTGAACGTAAGAAGATCACTCAATGGTATCACCGTGCCGATTCAGCTAAGCACAAGCTTGATATCCTAAAACAT
ATCATCACAGAGCAAGCTGAACGCAGCATCATCTTCTTGAAGACTCGTGACCGCCTAGGTGACCTACGAGCTCAATTAGA
AAGTGCACAGATCCCGTGTGTTTGGATCCAAGGTGAAATGCCTCAAGATCGTCGTAACAACGCGATTTCTCGTTTCCGCG
ATGGTTCTATCAACGTACTGCTGGCAACTGACGTCGCAGCTCGTGGTATCGACCTTCCAGATGTGAGCCACGTTATTAAC
TACGACATGCCGCGTACAGCAGATGTTTACCTACACCGCATCGGTCGTACGGCTCGTGCAGGTAAGAAAGGTAACGCGGT
TTCTATCATTGAAGCGCACGATCAACTAATGATTGAACGTGTTGCTCGTTACACTGAAGATGCGATCAAAGAGCGCTTCA
TCGAAGGCATGCGCCCAACGCACAAGAAAGCCGCGGTAACGAAGAAGAAAAAGCCGAAGAAAGAAGACAAGAAAGCGGTG
GCTAAGCAAAAAATTGCTAAGAAAAAGAAAATCGCTAAGAAAAAGAAAGCCGTTAAGAACAAGTAA

Upstream 100 bases:

>100_bases
CATGTGATCCTAATCACTAATGCTTCTATAATGTCCGACTACTCTTTTTTATCGTCTGCTTTTTGAGGCAGAAACATTTA
TTGCTTGTGGAGAAACAACA

Downstream 100 bases:

>100_bases
TCTAACCGCCTTTCAATGATTCAATAAAAAGCCCCATGCAGTTATCTGCATGGGGCTTTTTATTGTCTGGCTTATTATTG
TCTGGCCTGTTATCAGGCTA

Product: ATP-dependent RNA helicase SrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MIRTFAELDLNQELLKAIDEMGYERPTQIQAEAIPQALDGRDVLASAPTGTGKTASFVLPALQYLLDFPRKKSGPARMLI
LTPTRELAMQITEQARELAKYTSLNIFTITGGVMYQEHADILSTTQDIVVATPGRLMEYIEGERFDCRAIEWLVLDEADR
MLDMGFGPVVDRLSAECRWRKQTLLFSATLEGKGIEGFTEDLLKNPAEIDAKSSLRERKKITQWYHRADSAKHKLDILKH
IITEQAERSIIFLKTRDRLGDLRAQLESAQIPCVWIQGEMPQDRRNNAISRFRDGSINVLLATDVAARGIDLPDVSHVIN
YDMPRTADVYLHRIGRTARAGKKGNAVSIIEAHDQLMIERVARYTEDAIKERFIEGMRPTHKKAAVTKKKKPKKEDKKAV
AKQKIAKKKKIAKKKKAVKNK

Sequences:

>Translated_421_residues
MIRTFAELDLNQELLKAIDEMGYERPTQIQAEAIPQALDGRDVLASAPTGTGKTASFVLPALQYLLDFPRKKSGPARMLI
LTPTRELAMQITEQARELAKYTSLNIFTITGGVMYQEHADILSTTQDIVVATPGRLMEYIEGERFDCRAIEWLVLDEADR
MLDMGFGPVVDRLSAECRWRKQTLLFSATLEGKGIEGFTEDLLKNPAEIDAKSSLRERKKITQWYHRADSAKHKLDILKH
IITEQAERSIIFLKTRDRLGDLRAQLESAQIPCVWIQGEMPQDRRNNAISRFRDGSINVLLATDVAARGIDLPDVSHVIN
YDMPRTADVYLHRIGRTARAGKKGNAVSIIEAHDQLMIERVARYTEDAIKERFIEGMRPTHKKAAVTKKKKPKKEDKKAV
AKQKIAKKKKIAKKKKAVKNK
>Mature_421_residues
MIRTFAELDLNQELLKAIDEMGYERPTQIQAEAIPQALDGRDVLASAPTGTGKTASFVLPALQYLLDFPRKKSGPARMLI
LTPTRELAMQITEQARELAKYTSLNIFTITGGVMYQEHADILSTTQDIVVATPGRLMEYIEGERFDCRAIEWLVLDEADR
MLDMGFGPVVDRLSAECRWRKQTLLFSATLEGKGIEGFTEDLLKNPAEIDAKSSLRERKKITQWYHRADSAKHKLDILKH
IITEQAERSIIFLKTRDRLGDLRAQLESAQIPCVWIQGEMPQDRRNNAISRFRDGSINVLLATDVAARGIDLPDVSHVIN
YDMPRTADVYLHRIGRTARAGKKGNAVSIIEAHDQLMIERVARYTEDAIKERFIEGMRPTHKKAAVTKKKKPKKEDKKAV
AKQKIAKKKKIAKKKKAVKNK

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI20149629, Length=361, Percent_Identity=37.6731301939058, Blast_Score=248, Evalue=7e-66,
Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=35.4666666666667, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=35.5978260869565, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=35.5978260869565, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=36.056338028169, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=36.056338028169, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI41327776, Length=360, Percent_Identity=34.7222222222222, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=34.8189415041783, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI41327773, Length=376, Percent_Identity=34.3085106382979, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=36, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=36, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=35.230352303523, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=36.6492146596859, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=36.7123287671233, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=36.7123287671233, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=36.7123287671233, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=36.7123287671233, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=33.983286908078, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=33.5051546391753, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=35.0404312668464, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=35.0404312668464, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=33.6182336182336, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=35.0404312668464, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=35.4838709677419, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=35.4838709677419, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=34.4444444444444, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=34.453781512605, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=31.6455696202532, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=33.6134453781513, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI38569505, Length=381, Percent_Identity=34.9081364829396, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI38569503, Length=379, Percent_Identity=34.0369393139842, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=33.3333333333333, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=33.3333333333333, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=33.2425068119891, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI188035877, Length=375, Percent_Identity=33.0666666666667, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=31.3672922252011, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=32.8877005347594, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.620320855615, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI41327779, Length=402, Percent_Identity=32.8358208955224, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI8922886, Length=382, Percent_Identity=32.7225130890052, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI6005743, Length=382, Percent_Identity=32.9842931937173, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=30.8707124010554, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI164419732, Length=401, Percent_Identity=34.4139650872818, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=29.1169451073986, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI62241022, Length=363, Percent_Identity=33.0578512396694, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=33.2467532467532, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI256223453, Length=373, Percent_Identity=29.7587131367292, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=32.5513196480938, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI9966805, Length=335, Percent_Identity=30.7462686567164, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=27.6283618581907, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=375, Percent_Identity=27.2, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.4883720930233, Blast_Score=108, Evalue=1e-23,
Organism=Escherichia coli, GI1788930, Length=395, Percent_Identity=60, Blast_Score=473, Evalue=1e-135,
Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=39.8416886543536, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=38.2113821138211, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1790214, Length=381, Percent_Identity=34.3832020997375, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1787605, Length=340, Percent_Identity=36.4705882352941, Blast_Score=196, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17555296, Length=354, Percent_Identity=37.5706214689266, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI86570094, Length=378, Percent_Identity=36.7724867724868, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI17552642, Length=374, Percent_Identity=36.096256684492, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=335, Percent_Identity=37.910447761194, Blast_Score=221, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=400, Percent_Identity=33.5, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=35.752688172043, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=35.4838709677419, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17507877, Length=383, Percent_Identity=36.0313315926893, Blast_Score=214, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI71999646, Length=354, Percent_Identity=34.180790960452, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=354, Percent_Identity=34.180790960452, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=33.3333333333333, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=32.5520833333333, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17552114, Length=358, Percent_Identity=34.3575418994413, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=419, Percent_Identity=32.6968973747017, Blast_Score=207, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=372, Percent_Identity=34.6774193548387, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17510307, Length=372, Percent_Identity=34.6774193548387, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17510309, Length=372, Percent_Identity=34.6774193548387, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71995718, Length=405, Percent_Identity=35.0617283950617, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507879, Length=382, Percent_Identity=35.0785340314136, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=34.375, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=426, Percent_Identity=32.8638497652582, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17537549, Length=375, Percent_Identity=32.8, Blast_Score=194, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=368, Percent_Identity=33.9673913043478, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI115532546, Length=374, Percent_Identity=33.6898395721925, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=31.728045325779, Blast_Score=178, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=31.1170212765957, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=34.2857142857143, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=430, Percent_Identity=28.8372093023256, Blast_Score=164, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI25148203, Length=408, Percent_Identity=27.4509803921569, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=33.3333333333333, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI193206561, Length=375, Percent_Identity=27.7333333333333, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=32.7272727272727, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=31.1475409836066, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=32.7272727272727, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI193208216, Length=368, Percent_Identity=31.25, Blast_Score=154, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=32.3232323232323, Blast_Score=154, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=30.6493506493506, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=27.1232876712329, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=437, Percent_Identity=25.4004576659039, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25148205, Length=335, Percent_Identity=26.2686567164179, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71982862, Length=189, Percent_Identity=33.8624338624339, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=387, Percent_Identity=24.031007751938, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=41.6666666666667, Blast_Score=86, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=34.2541436464088, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6321856, Length=409, Percent_Identity=34.2298288508557, Blast_Score=230, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=35.5555555555556, Blast_Score=224, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=35.3760445682451, Blast_Score=219, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=36.4130434782609, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6325138, Length=386, Percent_Identity=34.4559585492228, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320173, Length=449, Percent_Identity=30.2895322939866, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6323947, Length=364, Percent_Identity=35.4395604395604, Blast_Score=201, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6321360, Length=355, Percent_Identity=35.4929577464789, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6324778, Length=386, Percent_Identity=32.1243523316062, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=437, Percent_Identity=33.1807780320366, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320449, Length=390, Percent_Identity=33.8461538461538, Blast_Score=190, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=369, Percent_Identity=32.2493224932249, Blast_Score=182, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6320119, Length=386, Percent_Identity=31.8652849740933, Blast_Score=182, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6319714, Length=384, Percent_Identity=30.9895833333333, Blast_Score=180, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=30.5882352941176, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=32.2314049586777, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321267, Length=412, Percent_Identity=30.8252427184466, Blast_Score=166, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=357, Percent_Identity=29.1316526610644, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=26.7942583732057, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=30.4, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6324366, Length=353, Percent_Identity=27.4787535410765, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6322876, Length=180, Percent_Identity=27.2222222222222, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323844, Length=358, Percent_Identity=24.3016759776536, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24662330, Length=370, Percent_Identity=36.7567567567568, Blast_Score=247, Evalue=9e-66,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=36.1111111111111, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=35.2785145888594, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=36.5439093484419, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24642151, Length=405, Percent_Identity=33.8271604938272, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24583279, Length=369, Percent_Identity=36.8563685636856, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24583281, Length=369, Percent_Identity=36.8563685636856, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI28574962, Length=372, Percent_Identity=36.0215053763441, Blast_Score=221, Evalue=8e-58,
Organism=Drosophila melanogaster, GI24644483, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644487, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI45551833, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644485, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=35.8333333333333, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=33.6898395721925, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI17985987, Length=405, Percent_Identity=34.5679012345679, Blast_Score=211, Evalue=5e-55,
Organism=Drosophila melanogaster, GI28575014, Length=353, Percent_Identity=35.6940509915014, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=35.2150537634409, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24584994, Length=390, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=8e-54,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=34.8189415041783, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=32.3204419889503, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17136814, Length=385, Percent_Identity=33.7662337662338, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=33.1460674157303, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=33.1460674157303, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=33.1460674157303, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI20130173, Length=469, Percent_Identity=30.9168443496802, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI24582080, Length=369, Percent_Identity=34.6883468834688, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24582078, Length=369, Percent_Identity=34.6883468834688, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI17136248, Length=369, Percent_Identity=34.6883468834688, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24582075, Length=369, Percent_Identity=34.6883468834688, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24666101, Length=441, Percent_Identity=31.2925170068027, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=35.3697749196142, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=31.5642458100559, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=31.5642458100559, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24643725, Length=386, Percent_Identity=33.9378238341969, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24642822, Length=394, Percent_Identity=30.2030456852792, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI21355559, Length=362, Percent_Identity=33.1491712707182, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17647335, Length=358, Percent_Identity=31.0055865921788, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI17136666, Length=499, Percent_Identity=26.8537074148297, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=29.8295454545455, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24640164, Length=355, Percent_Identity=26.1971830985915, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=29.080118694362, Blast_Score=114, Evalue=9e-26,
Organism=Drosophila melanogaster, GI28571338, Length=218, Percent_Identity=34.8623853211009, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI18859659, Length=218, Percent_Identity=34.8623853211009, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 47688; Mature: 47688

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTFAELDLNQELLKAIDEMGYERPTQIQAEAIPQALDGRDVLASAPTGTGKTASFVLP
CCCCHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHEECCCCCCCCHHHHHHH
ALQYLLDFPRKKSGPARMLILTPTRELAMQITEQARELAKYTSLNIFTITGGVMYQEHAD
HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEHHHHH
ILSTTQDIVVATPGRLMEYIEGERFDCRAIEWLVLDEADRMLDMGFGPVVDRLSAECRWR
HHHCCCCEEEECCHHHHHHHCCCCCCCHHEEEEEECCHHHHHHCCCHHHHHHHHHHHHHH
KQTLLFSATLEGKGIEGFTEDLLKNPAEIDAKSSLRERKKITQWYHRADSAKHKLDILKH
HHEEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IITEQAERSIIFLKTRDRLGDLRAQLESAQIPCVWIQGEMPQDRRNNAISRFRDGSINVL
HHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAVSIIEAHDQLMIER
EEECHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHH
VARYTEDAIKERFIEGMRPTHKKAAVTKKKKPKKEDKKAVAKQKIAKKKKIAKKKKAVKN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MIRTFAELDLNQELLKAIDEMGYERPTQIQAEAIPQALDGRDVLASAPTGTGKTASFVLP
CCCCHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHEECCCCCCCCHHHHHHH
ALQYLLDFPRKKSGPARMLILTPTRELAMQITEQARELAKYTSLNIFTITGGVMYQEHAD
HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEHHHHH
ILSTTQDIVVATPGRLMEYIEGERFDCRAIEWLVLDEADRMLDMGFGPVVDRLSAECRWR
HHHCCCCEEEECCHHHHHHHCCCCCCCHHEEEEEECCHHHHHHCCCHHHHHHHHHHHHHH
KQTLLFSATLEGKGIEGFTEDLLKNPAEIDAKSSLRERKKITQWYHRADSAKHKLDILKH
HHEEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IITEQAERSIIFLKTRDRLGDLRAQLESAQIPCVWIQGEMPQDRRNNAISRFRDGSINVL
HHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAVSIIEAHDQLMIER
EEECHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHH
VARYTEDAIKERFIEGMRPTHKKAAVTKKKKPKKEDKKAVAKQKIAKKKKIAKKKKAVKN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]