Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is ylaK [H]

Identifier: 218708389

GI number: 218708389

Start: 347785

End: 349203

Strand: Reverse

Name: ylaK [H]

Synonym: VS_0349

Alternate gene names: 218708389

Gene position: 349203-347785 (Counterclockwise)

Preceding gene: 218708393

Following gene: 218708362

Centisome position: 10.58

GC content: 47.08

Gene sequence:

>1419_bases
ATGAATGCAAGGCAAGCCGCACGTCGGCAAGGAGATGCTATGGGCGAGACCAACCGGAAGCTATTTGTTTTAGACACCAA
TATCCTACTTCACGAACCCTTCGCTATATTTTCTTTCCAAGAGCACGATGTCGTTATCCCAATGACAGTGCTAGAAGAAC
TCGACAGAATCAAAGACAGTAAAAGAGATGTTGCTCGTGATGCGAGAATTGCGATTCGAACGCTCGAAGACTTATTCAGG
GAAGCCACACCAGACCAAATATCGGAAGGCATCCCTTTTTCTAAAGACATAAACGCATCTGGCAGTATTTCAATACTCGC
TGACTACGAACTTCAAGAAAGTATCAAAGCCTTCGCCGATGACAAAGCTGGCGATAACCGAATCCTCAACGCAGTCCTCT
ATCTTCAAAATAAACGCGCGCCACGAGAAGTGGTTCTTATCACCAAAGACATCAACATGCGTTTACGAGCCAAAGGCGCC
GGTGTCCGTTTTGTTGAAGACTATCAAACCGACCAATTGATTGATGATATCCAATACCTCACAAAAGGCTTCCAACAACT
GGAAGGCTCATTTTGGGACGGTATCGATAATGTCGAGAGCAGAAGTTTAGGCGGAAAGACGCTGCACACCTTAGCAAGAG
CGCCGTTCGAGCCAACCTTTCTCAACCAGTATGTGATTGACGAAGAAAGTGACTTTGCCGCTCGAGTCGAAGAGATTGAA
ACTGAAAGTATTACACTAAGAGACCTCAGTCGCGAAAGACTAATGAATCGCAGAGCATGGGACATCACACCCAAAAACGT
TTATCAAGGCATGGCGATCGATGCCCTGCTCGACCCTGATATTGATCTGGTGATTCTTACAGGCGCAGCGGGGAGTGGTA
AGACGCTGTTAGCCATGGCTGCTGCACTTGAACAAACCATTGAGCGTAAGCAGTTCGATAAGATCATCGTAACCCGAAAC
ACACCTGATATAGGTGAGTCGATAGGGTTTCTTCCGGGTACAGAGGAAGAGAAGATGTTGCCTTGGTTAGCTGCAGTGAC
CGATACACTGGAAGCGCTGCACAAGAATGATCACTGCACAGAAGGCTCAATGAAGTACATCTGTGATAAAGCTAACATCC
AGTTCAAATCGATTAACTTTATGCGTGGCCGTTCAATTCAGAATGCGTTTGTGCTTTTGGATGAGTGTCAGAACCTCACC
GCTTCACAAATCAAAACCATCATCACCCGTTGTGGTGAAGGGACCAAGATCGTCTGCTCAGGAAACCTAGCGCAGATAGA
TTCTTCCTACCTAACTCCTGTGACCTCGGGGCTCACCTACATGGTCGAGCGTTTTAAAAACTTCGAAGGCAGTGCCAACA
TCCACCTCAATGGTGTGGTACGTAGCCGACTGGCTGAGTTCGCGGAAGAGAACATGTAG

Upstream 100 bases:

>100_bases
CTATGGAGAGCAGAATGCAGCTCTCAAATGAAGTTTAGGTGAGTTGTTGACTATCACTAGAATCAGATACTAACCTTTAT
ATGAGCTTAATCTACGTTCA

Downstream 100 bases:

>100_bases
ACTCTGCGCGCTCACAGAACCAGTAACCTATAAACAAAAAGCGCCTCACAATAGAGGCGCTTTCAATCTATTTTATGACG
AGAGATTTTGAAATTAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDSKRDVARDARIAIRTLEDLFR
EATPDQISEGIPFSKDINASGSISILADYELQESIKAFADDKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGA
GVRFVEDYQTDQLIDDIQYLTKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE
TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTIERKQFDKIIVTRN
TPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCTEGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLT
ASQIKTIITRCGEGTKIVCSGNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM

Sequences:

>Translated_472_residues
MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDSKRDVARDARIAIRTLEDLFR
EATPDQISEGIPFSKDINASGSISILADYELQESIKAFADDKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGA
GVRFVEDYQTDQLIDDIQYLTKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE
TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTIERKQFDKIIVTRN
TPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCTEGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLT
ASQIKTIITRCGEGTKIVCSGNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM
>Mature_472_residues
MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDSKRDVARDARIAIRTLEDLFR
EATPDQISEGIPFSKDINASGSISILADYELQESIKAFADDKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGA
GVRFVEDYQTDQLIDDIQYLTKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE
TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTIERKQFDKIIVTRN
TPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCTEGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLT
ASQIKTIITRCGEGTKIVCSGNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM

Specific function: Unknown

COG id: COG1875

COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PINc domain [H]

Homologues:

Organism=Escherichia coli, GI1787257, Length=181, Percent_Identity=37.0165745856354, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI145693103, Length=188, Percent_Identity=35.1063829787234, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714
- InterPro:   IPR006596 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 53016; Mature: 53016

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDS
CCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCEEEEEECCCCEEEHHHHHHHHHHHHHH
KRDVARDARIAIRTLEDLFREATPDQISEGIPFSKDINASGSISILADYELQESIKAFAD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHC
DKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGAGVRFVEDYQTDQLIDDIQYL
CCCCCHHHHHHHHHEECCCCCCEEEEEEECCCEEEEECCCCEEEEHHCCHHHHHHHHHHH
TKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE
HHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCHHHHHEEECCCCHHHHHHHHHC
TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMA
CCCEEHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHH
AALEQTIERKQFDKIIVTRNTPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCT
HHHHHHHHHHHHCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
EGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCS
CCCHHEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC
GNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM
CCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDS
CCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCEEEEEECCCCEEEHHHHHHHHHHHHHH
KRDVARDARIAIRTLEDLFREATPDQISEGIPFSKDINASGSISILADYELQESIKAFAD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHC
DKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGAGVRFVEDYQTDQLIDDIQYL
CCCCCHHHHHHHHHEECCCCCCEEEEEEECCCEEEEECCCCEEEEHHCCHHHHHHHHHHH
TKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE
HHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCHHHHHEEECCCCHHHHHHHHHC
TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMA
CCCEEHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHH
AALEQTIERKQFDKIIVTRNTPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCT
HHHHHHHHHHHHCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
EGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCS
CCCHHEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC
GNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM
CCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]