| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ylaK [H]
Identifier: 218708389
GI number: 218708389
Start: 347785
End: 349203
Strand: Reverse
Name: ylaK [H]
Synonym: VS_0349
Alternate gene names: 218708389
Gene position: 349203-347785 (Counterclockwise)
Preceding gene: 218708393
Following gene: 218708362
Centisome position: 10.58
GC content: 47.08
Gene sequence:
>1419_bases ATGAATGCAAGGCAAGCCGCACGTCGGCAAGGAGATGCTATGGGCGAGACCAACCGGAAGCTATTTGTTTTAGACACCAA TATCCTACTTCACGAACCCTTCGCTATATTTTCTTTCCAAGAGCACGATGTCGTTATCCCAATGACAGTGCTAGAAGAAC TCGACAGAATCAAAGACAGTAAAAGAGATGTTGCTCGTGATGCGAGAATTGCGATTCGAACGCTCGAAGACTTATTCAGG GAAGCCACACCAGACCAAATATCGGAAGGCATCCCTTTTTCTAAAGACATAAACGCATCTGGCAGTATTTCAATACTCGC TGACTACGAACTTCAAGAAAGTATCAAAGCCTTCGCCGATGACAAAGCTGGCGATAACCGAATCCTCAACGCAGTCCTCT ATCTTCAAAATAAACGCGCGCCACGAGAAGTGGTTCTTATCACCAAAGACATCAACATGCGTTTACGAGCCAAAGGCGCC GGTGTCCGTTTTGTTGAAGACTATCAAACCGACCAATTGATTGATGATATCCAATACCTCACAAAAGGCTTCCAACAACT GGAAGGCTCATTTTGGGACGGTATCGATAATGTCGAGAGCAGAAGTTTAGGCGGAAAGACGCTGCACACCTTAGCAAGAG CGCCGTTCGAGCCAACCTTTCTCAACCAGTATGTGATTGACGAAGAAAGTGACTTTGCCGCTCGAGTCGAAGAGATTGAA ACTGAAAGTATTACACTAAGAGACCTCAGTCGCGAAAGACTAATGAATCGCAGAGCATGGGACATCACACCCAAAAACGT TTATCAAGGCATGGCGATCGATGCCCTGCTCGACCCTGATATTGATCTGGTGATTCTTACAGGCGCAGCGGGGAGTGGTA AGACGCTGTTAGCCATGGCTGCTGCACTTGAACAAACCATTGAGCGTAAGCAGTTCGATAAGATCATCGTAACCCGAAAC ACACCTGATATAGGTGAGTCGATAGGGTTTCTTCCGGGTACAGAGGAAGAGAAGATGTTGCCTTGGTTAGCTGCAGTGAC CGATACACTGGAAGCGCTGCACAAGAATGATCACTGCACAGAAGGCTCAATGAAGTACATCTGTGATAAAGCTAACATCC AGTTCAAATCGATTAACTTTATGCGTGGCCGTTCAATTCAGAATGCGTTTGTGCTTTTGGATGAGTGTCAGAACCTCACC GCTTCACAAATCAAAACCATCATCACCCGTTGTGGTGAAGGGACCAAGATCGTCTGCTCAGGAAACCTAGCGCAGATAGA TTCTTCCTACCTAACTCCTGTGACCTCGGGGCTCACCTACATGGTCGAGCGTTTTAAAAACTTCGAAGGCAGTGCCAACA TCCACCTCAATGGTGTGGTACGTAGCCGACTGGCTGAGTTCGCGGAAGAGAACATGTAG
Upstream 100 bases:
>100_bases CTATGGAGAGCAGAATGCAGCTCTCAAATGAAGTTTAGGTGAGTTGTTGACTATCACTAGAATCAGATACTAACCTTTAT ATGAGCTTAATCTACGTTCA
Downstream 100 bases:
>100_bases ACTCTGCGCGCTCACAGAACCAGTAACCTATAAACAAAAAGCGCCTCACAATAGAGGCGCTTTCAATCTATTTTATGACG AGAGATTTTGAAATTAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDSKRDVARDARIAIRTLEDLFR EATPDQISEGIPFSKDINASGSISILADYELQESIKAFADDKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGA GVRFVEDYQTDQLIDDIQYLTKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTIERKQFDKIIVTRN TPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCTEGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLT ASQIKTIITRCGEGTKIVCSGNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM
Sequences:
>Translated_472_residues MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDSKRDVARDARIAIRTLEDLFR EATPDQISEGIPFSKDINASGSISILADYELQESIKAFADDKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGA GVRFVEDYQTDQLIDDIQYLTKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTIERKQFDKIIVTRN TPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCTEGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLT ASQIKTIITRCGEGTKIVCSGNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM >Mature_472_residues MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDSKRDVARDARIAIRTLEDLFR EATPDQISEGIPFSKDINASGSISILADYELQESIKAFADDKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGA GVRFVEDYQTDQLIDDIQYLTKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMAAALEQTIERKQFDKIIVTRN TPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCTEGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLT ASQIKTIITRCGEGTKIVCSGNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=181, Percent_Identity=37.0165745856354, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI145693103, Length=188, Percent_Identity=35.1063829787234, Blast_Score=99, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 53016; Mature: 53016
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDS CCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCEEEEEECCCCEEEHHHHHHHHHHHHHH KRDVARDARIAIRTLEDLFREATPDQISEGIPFSKDINASGSISILADYELQESIKAFAD HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHC DKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGAGVRFVEDYQTDQLIDDIQYL CCCCCHHHHHHHHHEECCCCCCEEEEEEECCCEEEEECCCCEEEEHHCCHHHHHHHHHHH TKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE HHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCHHHHHEEECCCCHHHHHHHHHC TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMA CCCEEHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHH AALEQTIERKQFDKIIVTRNTPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCT HHHHHHHHHHHHCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC EGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCS CCCHHEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC GNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM CCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MNARQAARRQGDAMGETNRKLFVLDTNILLHEPFAIFSFQEHDVVIPMTVLEELDRIKDS CCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCEEEEEECCCCEEEHHHHHHHHHHHHHH KRDVARDARIAIRTLEDLFREATPDQISEGIPFSKDINASGSISILADYELQESIKAFAD HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHC DKAGDNRILNAVLYLQNKRAPREVVLITKDINMRLRAKGAGVRFVEDYQTDQLIDDIQYL CCCCCHHHHHHHHHEECCCCCCEEEEEEECCCEEEEECCCCEEEEHHCCHHHHHHHHHHH TKGFQQLEGSFWDGIDNVESRSLGGKTLHTLARAPFEPTFLNQYVIDEESDFAARVEEIE HHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCHHHHHEEECCCCHHHHHHHHHC TESITLRDLSRERLMNRRAWDITPKNVYQGMAIDALLDPDIDLVILTGAAGSGKTLLAMA CCCEEHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHH AALEQTIERKQFDKIIVTRNTPDIGESIGFLPGTEEEKMLPWLAAVTDTLEALHKNDHCT HHHHHHHHHHHHCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC EGSMKYICDKANIQFKSINFMRGRSIQNAFVLLDECQNLTASQIKTIITRCGEGTKIVCS CCCHHEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC GNLAQIDSSYLTPVTSGLTYMVERFKNFEGSANIHLNGVVRSRLAEFAEENM CCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]