Click here to switch to the map view.

The map label for this gene is 218708348

Identifier: 218708348

GI number: 218708348

Start: 288416

End: 288562

Strand: Reverse

Name: 218708348

Synonym: VS_0295

Alternate gene names: NA

Gene position: 288562-288416 (Counterclockwise)

Preceding gene: 218708355

Following gene: 218708345

Centisome position: 8.75

GC content: 38.1

Gene sequence:

>147_bases
ATGACCTATCTTTCCTACTTTCTAACATTGCAGCTTCCATACCAAGTTAGCTACAACCACAAACTCCTTATTTATCAGGC
AAATAAAAAGCCACACATCTTCATGCGTGGCTTTTCGGAAACTCACAATGGTAAATTTAGCCTCTAA

Upstream 100 bases:

>100_bases
CCGCTAGTACCGTCATAAACGTAATACCAGTAACGAGTAAAGTTGCGACGAAAATAAGAACAAAGATTAATTCAAACATA
ATGGTCTCCCTAATGAGTTC

Downstream 100 bases:

>100_bases
TGGCGAATTTAGCCTTGTTATTTAAACCTTAAGCTTCTAACTTTTAATTCTTAGCTTTTGGCTTTTGCTTTAATCTTGAG
GGTGTCTATACGTTTAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MTYLSYFLTLQLPYQVSYNHKLLIYQANKKPHIFMRGFSETHNGKFSL

Sequences:

>Translated_48_residues
MTYLSYFLTLQLPYQVSYNHKLLIYQANKKPHIFMRGFSETHNGKFSL
>Mature_47_residues
TYLSYFLTLQLPYQVSYNHKLLIYQANKKPHIFMRGFSETHNGKFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5770; Mature: 5639

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLSYFLTLQLPYQVSYNHKLLIYQANKKPHIFMRGFSETHNGKFSL
CCEEEEEEEEEECEEECCCCEEEEEECCCCCEEEEEECCCCCCCEECC
>Mature Secondary Structure 
TYLSYFLTLQLPYQVSYNHKLLIYQANKKPHIFMRGFSETHNGKFSL
CEEEEEEEEEECEEECCCCEEEEEECCCCCEEEEEECCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA