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The map label for this gene is ygeG [H]

Identifier: 218702497

GI number: 218702497

Start: 4419601

End: 4420098

Strand: Direct

Name: ygeG [H]

Synonym: ECIAI39_4252

Alternate gene names: 218702497

Gene position: 4419601-4420098 (Clockwise)

Preceding gene: 218702496

Following gene: 218702498

Centisome position: 86.12

GC content: 35.94

Gene sequence:

>498_bases
ATGGAAAGCACAAATCTGGATTTAGAAGAAAATAAAGAAATTGCCAGTAAGTTCGAACGTGCATTAGGTATGGGAGCAAC
GCTTGCAGAGCTGCATGGCATAACCCCGGATACCCTTGAAGGCGTTTATGCTTACGCTTATAACTTTTATGAAAAAGGAA
GACTTGACGAAGCTGAACTCTTTTTTAAATTTCTCTGTATTTATGATTTCCAAAATTATAACTATCTAAAAGGATATGCC
GCCGTCTGTCAATTGAAGAAAGATTATCAAAAGGCATTCGACATGTATCATATCTGTTTAATGCTATCTCCCGATAACGA
TTTCTCTTTGGTTTATTATATGGGTCAATGCCAGATGGGCTTAAAAAACATTAAAATGGCCACTGAGTTATTTAATACTG
TCGTAACCTATAGTCAAAATGAAAAAATTAAAGAGATGGCTACTGCTTATCTTGAACTTTTGACAGCCAATACCGAAGAG
GAAGTTCAAACAGAGTGA

Upstream 100 bases:

>100_bases
AGCCCAACGGATGGGCATAAAAATGAGCGAATTTTGATATCACCACCCTCTAAAAAATGGTGAAGTCTGAACAAAGAATG
TTCGAAAGGAGAGAGTAGAG

Downstream 100 bases:

>100_bases
GTCGGCAAAATGAACATAAATGGAAAAAACGCTTCTTTTACGTCTGAAGAGTTAGCCAGGAAATATCATGAGGAAGCCAC
GGTTGATTTAAAAAATAACC

Product: putative type III secretion chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MESTNLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAELFFKFLCIYDFQNYNYLKGYA
AVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMGLKNIKMATELFNTVVTYSQNEKIKEMATAYLELLTANTEE
EVQTE

Sequences:

>Translated_165_residues
MESTNLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAELFFKFLCIYDFQNYNYLKGYA
AVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMGLKNIKMATELFNTVVTYSQNEKIKEMATAYLELLTANTEE
EVQTE
>Mature_165_residues
MESTNLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAELFFKFLCIYDFQNYNYLKGYA
AVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMGLKNIKMATELFNTVVTYSQNEKIKEMATAYLELLTANTEE
EVQTE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lcrH/sycD chaperone family [H]

Homologues:

Organism=Escherichia coli, GI1789215, Length=148, Percent_Identity=46.6216216216216, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005415
- InterPro:   IPR016379
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 19114; Mature: 19114

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTNLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAEL
CCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
FFKFLCIYDFQNYNYLKGYAAVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHH
LKNIKMATELFNTVVTYSQNEKIKEMATAYLELLTANTEEEVQTE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MESTNLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAEL
CCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
FFKFLCIYDFQNYNYLKGYAAVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHH
LKNIKMATELFNTVVTYSQNEKIKEMATAYLELLTANTEEEVQTE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]