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The map label for this gene is yiiX

Identifier: 218701358

GI number: 218701358

Start: 3185021

End: 3185629

Strand: Direct

Name: yiiX

Synonym: ECIAI39_3057

Alternate gene names: 218701358

Gene position: 3185021-3185629 (Clockwise)

Preceding gene: 218701357

Following gene: 218701360

Centisome position: 62.06

GC content: 51.89

Gene sequence:

>609_bases
ATGAAAATCAGGCTACTGATCCCCGGCCTGCTGGTTTCTGTGCCTGCATTTGCCTGGCAGCCGCAAACTGGCGACATCAT
CTTTCAAATCTCTCGCTCATCGCAAAGTAAAGCGATCCAACTGGCGACCCATTCCGATTACAGCCATACAGGTATGCTGG
TGATGCGTAACAAAAAGCCCTACGTTTTTGAAGCGGTCGGCCCGGTGAAATACACCCCGCTCAAGCAGTGGATCGCCCAC
GGTGAAGATGGCAAATACATTGTTCGCCGCGTTGAAGGTGGGCTGAATACCGAACAACAGCAAAAACTGGCGCAAACGGC
AAAACGTTATCTCGGCAAACCGTATGACTTTAGTTTCTCGTGGAGCGACGATCGCCAGTACTGCTCGGAAGTCGTTTGGA
AGGTTTATCAGAATGCGCTGGGAATGCGCGTAGGCGAACAGCAGAAGTTGAAAGAGTTCGATCTCAGCAACCCGCTGGTC
CAGGCGAAGCTCAAAGAACGCTACGGCAAAAATATTCCGCTTGAGGAAACGGTAGTTTCACCCCAAGCCGTTTTCGACGC
GCCACAACTCACCACAGTCGCCAAAGAATGGCCGCTGTTTTCGTGGTAA

Upstream 100 bases:

>100_bases
TGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAAAGCGGAAAAGAGCGGCGTGGAGTTAACCAGCCGCTTTTT
TCATACATGGACGTTTAACT

Downstream 100 bases:

>100_bases
TACGACCAAAATTCAGGCACAAAAAAAGCGCCGTGCGGCGCTTTTTTCGGAAATCCGGTCTTATTTGCTGCCCGGGATGT
TGAAACGCTTGTTGAAGCGG

Product: putative peptidoglycan peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKIRLLIPGLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFEAVGPVKYTPLKQWIAH
GEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW

Sequences:

>Translated_202_residues
MKIRLLIPGLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFEAVGPVKYTPLKQWIAH
GEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW
>Mature_202_residues
MKIRLLIPGLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFEAVGPVKYTPLKQWIAH
GEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yebB [H]

Homologues:

Organism=Escherichia coli, GI1790372, Length=202, Percent_Identity=94.5544554455445, Blast_Score=379, Evalue=1e-107,
Organism=Escherichia coli, GI87081991, Length=180, Percent_Identity=28.8888888888889, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23139; Mature: 23139

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRLLIPGLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKP
CEEEEECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC
YVFEAVGPVKYTPLKQWIAHGEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFS
EEEEECCCCEECHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCC
PQAVFDAPQLTTVAKEWPLFSW
CHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIRLLIPGLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKP
CEEEEECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC
YVFEAVGPVKYTPLKQWIAHGEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFS
EEEEECCCCEECHHHHHHHCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCC
PQAVFDAPQLTTVAKEWPLFSW
CHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 7868617 [H]