Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is hcaB
Identifier: 218701051
GI number: 218701051
Start: 2844423
End: 2845235
Strand: Direct
Name: hcaB
Synonym: ECIAI39_2742
Alternate gene names: 218701051
Gene position: 2844423-2845235 (Clockwise)
Preceding gene: 218701050
Following gene: 218701052
Centisome position: 55.42
GC content: 56.33
Gene sequence:
>813_bases ATGAGCGATCTGCATAACGAGTCCATCTTTATTACCGGCGGCGGATCGGGATTAGGCCTGGCGCTGGTCGAGCGATTTAT CGAAGAAGGCGCGCAGGTTGCCACGCTGGAACTGTCGGCGGCGAAAGTCGCCAGTCTGCGTCAGCGATTTGGTGAACATA TTCTGGCGGTGGAAGGCAACGTGACCTGTTATGCCGATTATCAACGCGCGCTCGATCAGATCCTGACTCGTTCTGGCAAA CTGGATTGTTTTATCGGCAATGCGGGCATCTGGGATCACAATGCCTCACTGGTTAATACTCCCGCAGAGACGCTCGAAAC CGGCTTCCACGAGCTGTTTAACGTCAACGTACTCGGTTACCTGCTGAGCGCAAAAGCCTGCGCTCCGGCGTTAATCGCCA GTGAAGGCAGCATGATTTTCACACTGTCAAATGCCGCCTGGTATCCCGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAA CATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGG TATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAA TTGCCGCCATATTACCGCTGCAATTTTTCCCGCAACCGGCGGATTTTACGGGTCCGTATGTGATGTTGGCATCGCGGCGC AATAATCGCGCATTAAGCGGTGTGATGATCAACGCTGATGCGGGTTTAGCGATTCGCGGCATTCGCCACGTAGCGGCTGG GCTGGATCTTTAA
Upstream 100 bases:
>100_bases CGGGGAAAGCATTATGCCTGCCCGCCACCGATCCGCTAACCACTTATCCAGTACACGTTGAAGGTGATGACATCTTCATC GACTTACCGGAGGCGCAGCC
Downstream 100 bases:
>100_bases GGAAGCACGATGAAAGAAAAAACGATCATTATTGTCGGTGGTGGGCAAGCGGCGGCAATGGCTGCGGCCTCGCTTCGCCA GCAAGGGTTCACCGGTGAGC
Product: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
Products: NA
Alternate protein names: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; CI-dihydrodiol dehydrogenase; Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase; PP-dihydrodiol dehydrogenase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRALDQILTRSGK LDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLSAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRR NNRALSGVMINADAGLAIRGIRHVAAGLDL
Sequences:
>Translated_270_residues MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRALDQILTRSGK LDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLSAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRR NNRALSGVMINADAGLAIRGIRHVAAGLDL >Mature_269_residues SDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRALDQILTRSGKL DCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLSAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKH AATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRRN NRALSGVMINADAGLAIRGIRHVAAGLDL
Specific function: Converts 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol) into 3-(2,3- dihydroxylphenyl)propanoic acid (DHPP) and 2,3-dihydroxicinnamic acid (DHCI), respectively [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4758504, Length=234, Percent_Identity=29.9145299145299, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI40254992, Length=230, Percent_Identity=27.3913043478261, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI5031737, Length=194, Percent_Identity=29.8969072164948, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=29.8969072164948, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI83715985, Length=175, Percent_Identity=30.8571428571429, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1788891, Length=270, Percent_Identity=98.8888888888889, Blast_Score=546, Evalue=1e-157, Organism=Escherichia coli, GI1789208, Length=264, Percent_Identity=25, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=28.8065843621399, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI72000259, Length=270, Percent_Identity=26.2962962962963, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17563726, Length=271, Percent_Identity=26.9372693726937, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17560332, Length=277, Percent_Identity=23.4657039711191, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=25.6603773584906, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=23.9700374531835, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=27.7566539923954, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508895, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=25.7575757575758, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=203, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI23397609, Length=184, Percent_Identity=30.9782608695652, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI17737361, Length=268, Percent_Identity=27.6119402985075, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643142, Length=187, Percent_Identity=28.8770053475936, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.3.1.-
Molecular weight: Translated: 28514; Mature: 28383
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGN CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCEEEEEECC VTCYADYQRALDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGY EEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH LLSAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRV HHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE NGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRR CCCCCCCCHHHCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC NNRALSGVMINADAGLAIRGIRHVAAGLDL CCCEEEEEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGN CCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCEEEEEECC VTCYADYQRALDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGY EEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH LLSAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRV HHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE NGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRR CCCCCCCCHHHCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC NNRALSGVMINADAGLAIRGIRHVAAGLDL CCCEEEEEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA