Definition | Escherichia coli IAI39 chromosome, complete genome. |
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Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is hcaF
Identifier: 218701049
GI number: 218701049
Start: 2843588
End: 2844106
Strand: Direct
Name: hcaF
Synonym: ECIAI39_2740
Alternate gene names: 218701049
Gene position: 2843588-2844106 (Clockwise)
Preceding gene: 218701048
Following gene: 218701050
Centisome position: 55.41
GC content: 51.83
Gene sequence:
>519_bases ATGAGTGCGCAAGTTTCACTGGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGTCTGCTGGATGACTG GAAATTTCGTGACTGGCTGGCACAGCTCGACGAAGAAATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCG ACCGCCGCAAAGGCGTCCAGCCACCAACGACCTGGATTTTTAATGACACTAAAGACCAGCTGGAGCGGCGAATCGCCCGT CTGGAAACGGGCATGGCCTGGGCAGAAGAGCCGCCATCACGCACTCGTCACTTAATCAGCAACTGCCAGGTAAGCGAAAC CGACATCCCAAACGTATTTGCTGTGCGGGTGAATTATCTACTTTATCGGGCACAAAAAGAGCGCGATGAAACATTCTATG TTGGAACGCGTTTCGACAAAGTTCGCCGTCTGGAAGATGACAACTGGCGCTTGCTGGAACGGGATATCGTCCTGGATCAA GCGGTGATCACTTCCCATAACCTGAGTGTACTGTTCTGA
Upstream 100 bases:
>100_bases CCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCT TACCAGCAGGAGGTGATGAA
Downstream 100 bases:
>100_bases TGAATCGAATTTATGCGTGTCCCGTTGCGGATGTGCCGGAGGGTGAGGCTCTCCGGATCGATACCTCGCCCGTCATCGCC CTGTTCAACGTAGGCGGCGA
Product: 3-phenylpropionate dioxygenase subunit beta
Products: NA
Alternate protein names: Digoxigenin subunit beta [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIAR LETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF
Sequences:
>Translated_172_residues MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIAR LETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF >Mature_171_residues SAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARL ETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQA VITSHNLSVLF
Specific function: Part of the multicomponent 3-phenylpropionate dioxygenase. Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
Organism=Escherichia coli, GI1788889, Length=172, Percent_Identity=99.4186046511628, Blast_Score=353, Evalue=3e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.19 [H]
Molecular weight: Translated: 20565; Mature: 20434
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQ CCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYL CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF HHHHHHCCCCEEEEECHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure SAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQ CCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYL CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF HHHHHHCCCCEEEEECHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA