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The map label for this gene is ypdI

Identifier: 218700844

GI number: 218700844

Start: 2616495

End: 2616770

Strand: Direct

Name: ypdI

Synonym: ECIAI39_2519

Alternate gene names: 218700844

Gene position: 2616495-2616770 (Clockwise)

Preceding gene: 218700838

Following gene: 218700847

Centisome position: 50.98

GC content: 38.04

Gene sequence:

>276_bases
ATGAAAGTAAACTTAATGCTTTTTAGCTTATTTTTATTGGTCTCTATTATGGCATGCAATGTTTTTGCATTTTCTATTTC
TGGTGGTGGTAGTGAGGCGAGCTATAAAGAGACAGAAAAAACGTCAATGATGACGACAACTCATTCTACAAAATTTCAGC
CATCACAGGCGATTTTGTTAAAAATGAGAGAAGATGCGCCACCATTAAACCTCACAGAAGAAATTCCGCCCCCTTTTCCG
ACAAAGCCGAATTATCTTATCCATCCTGTGCGATAG

Upstream 100 bases:

>100_bases
AGATGTCATTTATTATATCGATGTAAATACTGATTAATTATATGTAAATACAGCAATAACGTCGTAGGTTTTCAGTGAAC
CATTTTCAGGATAACTTTCT

Downstream 100 bases:

>100_bases
CGTCTGTCACACGGCAGGTGAACAATCATGTCTGATGCTGATGTGAACACCTGCCCAAATGAGCCATCCTGACCCACTAT
CGCCTGCCATACCCCACCAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKVNLMLFSLFLLVSIMACNVFAFSISGGGSEASYKETEKTSMMTTTHSTKFQPSQAILLKMREDAPPLNLTEEIPPPFP
TKPNYLIHPVR

Sequences:

>Translated_91_residues
MKVNLMLFSLFLLVSIMACNVFAFSISGGGSEASYKETEKTSMMTTTHSTKFQPSQAILLKMREDAPPLNLTEEIPPPFP
TKPNYLIHPVR
>Mature_91_residues
MKVNLMLFSLFLLVSIMACNVFAFSISGGGSEASYKETEKTSMMTTTHSTKFQPSQAILLKMREDAPPLNLTEEIPPPFP
TKPNYLIHPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367134, Length=91, Percent_Identity=92.3076923076923, Blast_Score=173, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10163; Mature: 10163

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLMLFSLFLLVSIMACNVFAFSISGGGSEASYKETEKTSMMTTTHSTKFQPSQAILL
CCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE
KMREDAPPLNLTEEIPPPFPTKPNYLIHPVR
EECCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKVNLMLFSLFLLVSIMACNVFAFSISGGGSEASYKETEKTSMMTTTHSTKFQPSQAILL
CCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE
KMREDAPPLNLTEEIPPPFPTKPNYLIHPVR
EECCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]