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The map label for this gene is yfcC

Identifier: 218700772

GI number: 218700772

Start: 2534366

End: 2535886

Strand: Direct

Name: yfcC

Synonym: ECIAI39_2445

Alternate gene names: 218700772

Gene position: 2534366-2535886 (Clockwise)

Preceding gene: 218700771

Following gene: 218700776

Centisome position: 49.38

GC content: 51.94

Gene sequence:

>1521_bases
ATGTCCGCAATCACTGAATCTAAACCAACAAGAAGATGGGCAATGCCCGATACGTTGGTGATTATCTTTTTTGTTGCCAT
TTTAACCAGCCTTGCCACCTGGGTAGTTCCGGTGGGCATGTTTGACAGTCAGGAAGTGCAGTATCAGGTTGATGGTCAAA
CAAAAACACGCAAAGTCGTAGATCCACACTCATTCCGCATTCTGACTAACGAAGCAGGCGAACCTGAGTATCACCGCGTA
CAGCTGTTCACGACGGGCGATGAACGCCCGGGTCTGATGAACTTCCCGTTTGAAGGGTTAACCTCAGGATCGAAATACGG
GACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCATTGATA
ACGGTATCCTGGCGCTTATTCGCCATACCCGCGGAAATGAAATTCTCTTTATTCCTGCGCTGTTTATTCTGTTTTCACTT
GGCGGTGCGGTATTTGGTATGGGGGAAGAGGCCGTCGCCTTTGCCATTATCATCGCACCGCTAATGGTCCGGCTGGGCTA
TGACAGTATTACCACCGTCCTGGTGACTTATATTGCTACGCAAATCGGTTTTGCCAGTTCGTGGATGAACCCGTTTTGTG
TGGTTGTTGCTCAGGGGATTGCTGGCGTTCCGGTGCTTTCTGGCTCCGGGTTGCGCATCGTGGTGTGGGTTATCGCCACT
CTGATTGGCCTGATCTTTACCATGGTGTACGCCTCACGAGTGAAAAAGAATCCTCTTCTGTCACGCGTGCATGAGTCCGA
CCGCTTCTTTCGTGAAAAGCAGGCGGATGTTGAACAACGTCCGTTTACCTTTGGTGACTGGCTGGTATTGATTGTCCTGA
CCGCCGTAATGGTCTGGGTGATTTGGGGCGTGATCGTTAATGCCTGGTTTATTCCAGAAATTGCCAGCCAGTTCTTCACC
ATGGGTCTGGTGATTGGCATCATCGGCGTCGTTTTCCGCCTTAACGGCATGACGGTTAATACCATGGCTTCATCCTTTAC
CGAAGGGGCGCGAATGATGATCGCCCCTGCCCTGCTGGTGGGTTTCGCCAAAGGGATTTTGCTGCTGGTCGGTAATGGTG
AAGCGGGTGATGCCAGCGTGTTAAATACCATCCTCAACAGCATTGCCAATGCCATTAGCGGTCTGGACAATGCGGTCGCG
GCCTGGTTTATGTTGCTCTTCCAGGCAGTATTTAATTTCTTCGTGACGTCCGGTTCTGGTCAGGCGGCGTTAACCATGCC
GTTACTGGCACCGCTTGGCGATCTGGTCGGTGTTAACCGTCAGGTTACCGTGCTGGCGTTCCAGTTTGGTGATGGCTTCA
GCCACATCATTTACCCGACCTCAGCTTCGTTAATGGCAACGCTCGGTGTTTGCCGGGTGGACTTCCGTAACTGGCTGAAG
GTGGGCGCGACACTGCTTGGACTGCTGTTTATTATGTCCAGCGTCGTGGTGATCGGCGCTCAGTTGATGGGCTACCACTA
A

Upstream 100 bases:

>100_bases
TCCTTTCTGATTATCTTGCTTAACTGCGCTGCATCAATGAATTGCGCCATCTCACTTTGCATACTTACCACTTTGTTTTG
TGCAAGGGAATATTTGCGCT

Downstream 100 bases:

>100_bases
AAATGTTAAGAGCCGCAATTGCGGCTCTTTTTTCATTCTGCCGTTTCAGTCTCTACGGCTTCATTTTTGGCATTGCGCTT
CATCCACAACGCCAGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRV
QLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIAT
LIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFT
MGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVA
AWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
VGATLLGLLFIMSSVVVIGAQLMGYH

Sequences:

>Translated_506_residues
MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRV
QLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIAT
LIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFT
MGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVA
AWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
VGATLLGLLFIMSSVVVIGAQLMGYH
>Mature_505_residues
SAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQ
LFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLG
GAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIATL
IGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTM
GLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAA
WFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKV
GATLLGLLFIMSSVVVIGAQLMGYH

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA

Homologues:

Organism=Escherichia coli, GI87082082, Length=506, Percent_Identity=100, Blast_Score=1009, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFCC_ECOLI (P39263)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   D17576
- PIR:   H65001
- RefSeq:   AP_002898.1
- RefSeq:   NP_416801.2
- ProteinModelPortal:   P39263
- DIP:   DIP-11977N
- MINT:   MINT-1315864
- STRING:   P39263
- EnsemblBacteria:   EBESCT00000001316
- EnsemblBacteria:   EBESCT00000018051
- GeneID:   946780
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2295
- KEGG:   eco:b2298
- EchoBASE:   EB2491
- EcoGene:   EG12607
- eggNOG:   COG1288
- GeneTree:   EBGT00050000008896
- HOGENOM:   HBG377600
- OMA:   SGRYARN
- ProtClustDB:   PRK11588
- BioCyc:   EcoCyc:G7190-MONOMER
- Genevestigator:   P39263
- InterPro:   IPR018387
- InterPro:   IPR018385
- PANTHER:   PTHR10283:SF43

Pfam domain/function: PF03606 DcuC

EC number: NA

Molecular weight: Translated: 54797; Mature: 54666

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2339256c)-; HASH(0x23912a30)-; HASH(0x235bcc68)-; HASH(0x23684bd4)-; HASH(0x20a7fec0)-; HASH(0x23964550)-; HASH(0x237c0be8)-; HASH(0x23839a14)-; HASH(0x238604e0)-; HASH(0x2358e9a0)-; HASH(0x238cf21c)-; HASH(0x237211b0)-; HASH(0x236559c4)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
DPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIG
CCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAP
CHHEEHEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH
LMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
LIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH
IWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHH
GFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSG
HHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCC
QAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
CEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VGATLLGLLFIMSSVVVIGAQLMGYH
HHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
DPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIG
CCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAP
CHHEEHEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHCCCCHHHHHHHHHHHH
LMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHH
LIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHH
IWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHH
GFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSG
HHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCC
QAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK
CEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
VGATLLGLLFIMSSVVVIGAQLMGYH
HHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7883769