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The map label for this gene is ydbC

Identifier: 218700079

GI number: 218700079

Start: 1791148

End: 1792008

Strand: Direct

Name: ydbC

Synonym: ECIAI39_1710

Alternate gene names: 218700079

Gene position: 1791148-1792008 (Clockwise)

Preceding gene: 218700078

Following gene: 218700080

Centisome position: 34.9

GC content: 51.92

Gene sequence:

>861_bases
ATGAGCAGCAACACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGG
GGTTTTTGGCCCCCCAAGAGATCGCCACGTCGCTATAACTGTGCTGCGCGAGGCGCTGGCATTGGGCGTCAATCACATTG
ATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACC
ATTGTTACTAAAATTGGGGCGCGGCGTGGAGAGGACGCCTCCTGGTTGCCCGCATTTTCTCCGGCAGAGTTGCAAAAAGC
GGTGCACGATAATCTACGTAATCTCGGGCTGGACGTACTGGATGTGGTTAACCTGCGCGTTATGATGGGGGATGGTCATG
GCCCAGCGGAAGGATCGATTGAAGCCAGCCTGACCGTGCTGGCAGAGATGCAAGAACAAGGCCTGGTAAAACATATTGGT
CTGAGCAACGTTACACCGACGCAGGTTGCAGAGGCGCGTAAGATTACCGAAATCGTCTGTGTGCAGAACGAATACAACAT
TGCTCATCGTGCTGATGACGCAATGATTGATGCTTTGGCTCGTGACGGCATTGCCTACGTGCCGTTCTTTCCGCTCGGGG
GCTTTACGCCGCTGCAATCTTCAACGCTTTCCGATGTTGCTGCGAGCCTGGGTGCAACACCAATGCAGGTAGCGCTGGCG
TGGCTGTTACAACGTTCACCGAATATTTTGTTGATTCCTGGAACATCTTCTGTTGCGCATTTACGGGAGAATATGGCCGC
AGAAAAATTGCATCTTTCTGAGGAAGTGTTGTCTACGTTGGATGGTATTTCGCGAGAATAA

Upstream 100 bases:

>100_bases
GCAACTCATCCAGTAATCTTGTTTACGCCTTCGCATTATTTAACTCTTTTCGTTTCTATACTGATTTTTCTGAATTCGTT
TTATTACAGGGCAGGGTGCG

Downstream 100 bases:

>100_bases
CGAATATACAAAAGGGAAAGATGCATTTCCCTTTTGTTTCTTTTTTAATGGCATGGAGTGCATATGTTTAAGCCCAGGAT
TTGCAGCTGGATAGGTTTAC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLT
IVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQEQGLVKHIG
LSNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALA
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE

Sequences:

>Translated_286_residues
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLT
IVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQEQGLVKHIG
LSNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALA
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE
>Mature_285_residues
SSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTI
VTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQEQGLVKHIGL
SNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALAW
LLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=286, Percent_Identity=98.9510489510489, Blast_Score=578, Evalue=1e-166,
Organism=Escherichia coli, GI87081735, Length=328, Percent_Identity=27.7439024390244, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788070, Length=309, Percent_Identity=25.8899676375405, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786400, Length=257, Percent_Identity=27.6264591439689, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788081, Length=260, Percent_Identity=22.6923076923077, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30756; Mature: 30625

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG
CCCCEEEECCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL
CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
DVVNLRVMMGDGHGPAEGSIEASLTVLAEMQEQGLVKHIGLSNVTPTQVAEARKITEIVC
HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHEEE
VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALA
ECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG
CCCEEEECCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL
CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
DVVNLRVMMGDGHGPAEGSIEASLTVLAEMQEQGLVKHIGLSNVTPTQVAEARKITEIVC
HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHEEE
VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALA
ECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]