Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is yhjG
Identifier: 218697233
GI number: 218697233
Start: 4041451
End: 4043526
Strand: Reverse
Name: yhjG
Synonym: EC55989_3970
Alternate gene names: 218697233
Gene position: 4043526-4041451 (Counterclockwise)
Preceding gene: 218697234
Following gene: 218697229
Centisome position: 78.44
GC content: 53.52
Gene sequence:
>2076_bases ATGAGGAAGCGAACGATGAGCAAGGCAGGCAAAATAACCGCTGCGATTTCAGGGGCTTTCTTGTTGTTGATTGTCGTGGC GATCATTTTGATTGCAACTTTTGACTGGAATCGACTCAAACCGACCATCAACCAGAAAGTCTCTGCGGAGTTGAATCGTC CGTTCGCTATCCGTGGCGATCTGGGCGTGGTGTGGGAGCGGCAAAAACAAGAAACTGGCTGGCGCAGCTGGGTGCCGTGG CCCCATGTACACGCGGAAGACATCATTCTTGGCAATCCACCGGATATTCCCGAAGTCACGATGGTGCATTTGCCACGCGT AGAGGCAACGCTGGCCCCGCTGGCGCTGCTGACCAAAACGGTCTGGCTGCCGTGGATCAAGCTCGAAAAGCCCGACGCGC GCCTGATTCGCCTCTCCGAAAAGAACAATAACTGGACGTTTAATCTCGCCAACGATGATAACAAAGACGCGAATGCAAAG CCGTCGGCATGGTCGTTTCGGCTGGATAATATTCTTTTCGATCAAGGGCGGATCGCTATTGATGACAAAGTAAGCAAAGC GGATCTGGAGATTTTTGTTGATCCGTTAGGCAAGCCGCTGCCGTTCAGCGAAGTTACTGGATCGAAAGGTAAAGCGGATA AAGAAAAGGTGGGCGATTACGTTTTTGGCCTGAAGGCGCAGGGACGTTATAACGGTGAACCGCTCACGGGTACGGGAAAA ATAGGCGGTATGCTGGCGCTGCGTGGCGAAGGGACGCCGTTTCCGGTACAGGCTGATTTCCGCTCTGGTAACACCCGTGT TGCTTTTGATGGCGTCGTGAATGACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGG GTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATC GACACTGAAAAATCGTCGGTCTTTGATTATCGCGGTTTTAATGGGCGAATTGGCGATAGCGATATCCACGGTTCTCTGGT CTACACCACCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCGGCTGGCGGACCTGGGACCGT TAATTGGCGTTGACTCCGGGAAAGGGGCAGAAAAGTCGAAACGGTCTGAACAGAAGAAGGGCGAAAAAAGCGTTCAGCCT GCGGGCAAAGTGCTGCCTTATGACCGCTTCGAAACCGATAAATGGGACGTTATGGATGCCGATGTTCGCTTCAAAGGGCG GCGCATTGAGCATGGCAGTAGCCTGCCGATTAGCGATCTTTCTACTCATATCATCCTCAAAAATGCTGACCTGCGCCTGC AACCGCTGAAATTTGGCATGGCGGGCGGCAGCATTGCGGCGAATATCCATCTGGAAGGCGATAAAAAGCCGATGCAGGGG CGGGCAGATATTCAGGCTCGTCGACTGAAACTGAAAGAACTGATGCCCGATGTGGAACTGATGCAGAAGACGCTGGGGGA AATGAACGGTGACGCGGAACTACGCGGTAGCGGTAACTCGGTGGCGGCGCTTTTAGGCAACAGTAACGGCAACCTGAAAC TGTTGATGAATGACGGGCTGGTGAGCCGCAACCTGATGGAGATTGTTGGGCTGAATGTCGGCAACTACATTGTCGGTGCG ATATTTGGTGACGATGAGGTGCGGGTGAACTGCGCGGCGGCGAATCTGAATATTGCCAACGGCGTGGCGCGCCCGCAGAT TTTTGCTTTCGATACTGAGAACGCGTTGATTAATGTTACCGGCACGGCAAGTTTTGCTTCGGAACAGCTGGATTTGACTA TTGATCCGGAGAGTAAAGGGATTCGGATTATCACACTGCGTTCGCCGCTGTATGTGCGTGGGACGTTTAAAAATCCGCAG GCTGGGGTGAAAGCCGGGCCGTTGATTGCCCGTGGTGCTGTTGCTGCGGCACTGGCAACGCTGGTAACACCGGCGGCGGC GTTACTGGCACTGATCTCACCTTCCGAAGGGGAGGCTAATCAGTGTCGGACGATATTGTCGCAGATGAAGAAGTGA
Upstream 100 bases:
>100_bases CCCGGCACCGATAGAAACGCTGAATACGGCGGTTCTGGCGCTATAAGCTGCCTCATTTTCCGCCTGGCTGGACTATCTTT AGGACTGGCACAGGAAGAAT
Downstream 100 bases:
>100_bases TGAGGTTGGATTGTGTTTGCTGGTGAGTTCGGGAGCAGCGTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGG GACTGTTTTGTGCGTGTTGA
Product: putative outer membrane biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 691; Mature: 691
Protein sequence:
>691_residues MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPW PHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK PSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKI DTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQP AGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQG RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGA IFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ AGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK
Sequences:
>Translated_691_residues MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPW PHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK PSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKI DTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQP AGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQG RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGA IFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ AGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK >Mature_691_residues MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPW PHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAK PSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKI DTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQP AGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQG RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGA IFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQ AGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=686, Percent_Identity=100, Blast_Score=1386, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 75131; Mature: 75131
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGD CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCCEEEECC LGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKT CCEEEECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHH VWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAI HHCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCEEECCCCEEE DDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK CCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCC IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELT CCCEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCCCCCHHHHC GVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGD EEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCC VESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDA CCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC DVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQG CEEECCEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCC RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCEEEEECCCC VSRNLMEIVGLNVGNYIVGAIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVT CHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEE GTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALAT ECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH LVTPAAALLALISPSEGEANQCRTILSQMKK HHHHHHHHHEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRKRTMSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGD CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHCCCCEEEECC LGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKT CCEEEECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHH VWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAI HHCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCEEECCCCEEE DDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGK CCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCC IGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELT CCCEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCCCCCHHHHC GVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGD EEECCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCC VESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDA CCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC DVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQG CEEECCEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCC RADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCEEEEECCCC VSRNLMEIVGLNVGNYIVGAIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVT CHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEE GTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALAT ECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH LVTPAAALLALISPSEGEANQCRTILSQMKK HHHHHHHHHEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]