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The map label for this gene is pcoD

Identifier: 218697173

GI number: 218697173

Start: 3971125

End: 3972054

Strand: Reverse

Name: pcoD

Synonym: EC55989_3903

Alternate gene names: 218697173

Gene position: 3972054-3971125 (Counterclockwise)

Preceding gene: 218697174

Following gene: 218697172

Centisome position: 77.05

GC content: 47.31

Gene sequence:

>930_bases
ATGAACGACCTGATTATGATTGTTATTCGTTTTCTTCTTTATCTGGATTTGATGGTAATATTTGGATTGCCATTTTTTCA
GATATATGGAATAAGCGGTGTCAGACATGAAACCTATAACCTGACTAATTTCAGGTCGTTTATAACTTTTGCTGTTGTTA
CAGGCATCATTCTTACTGGCATTAATATGCTCCTGGTATCTAATGCCATGAGTGGAGTAACTGACCTCAGAGAATTATCC
ATCCATGTTATCGAGATGGTGATAGAAGAAACTGATGTGGGTATTAGCTGGATTGTCAGGCTCTGTGCCCTGTTTACCAC
ACTCGGTGCTTTGTTCCTTTACACTAATAAGAGAGTATTGTCCTGCCTGCTGATGACGATGAGTGGGGGCGTGGCGCTGG
CTACACTTGCCTGGGGAGGACACGCCGTTATGCATGACGGTCTGCATTACTATCTCCATTTACTGAGCGATCTGACCCAT
CTCGGCGCTGCAGGTGCCTGGACAGGTGCTCTGGTTGCATTTGCTATCCTGCTGATGCGCAGAAACGAGCATAATGCACA
GAGCGTCATTGTGATATCTGACTCCCTGGCAAAATTTGCCACGGCAGGAACGGTGATTGTTGTAGCCCTGATCCTGAGTG
CGCTGGTCAACTATCTGTATATTGCTGAGGGTAACTTAACTCCCTTATTCAACAGTTCCTGGGGGAGGATATTGCTTGCC
AAGACGGCTCTGTTTGTTCTGATGCTTCTTCTGGCTGCAGCAAACCGGTTTCACCTGGGTCCCCGGCTTGAAGTTATGGT
CAGGGAAGGGAATTATGATCGCAGCGTTGCCCTGATGCGAAACAGCATCCTGACAGAATTCGTTGTTGCGATTATCATTC
TGGGCGCCGTAGCGTGGCTCGGAATGCTTGCTCCGTCTCAGGTCAGCTAG

Upstream 100 bases:

>100_bases
GAGCCTTTACCCGCTGGCACTTATCGTGTTGACTGGCGCGCGGTTTCTTCAGATACGCACCCTATTACCGGTAATTACAC
CTTTACAGTGAAGTAATATT

Downstream 100 bases:

>100_bases
GGGACAGCCAAAGCTCATGCGTGAGATTTTTACTTTCATATCAGCGAGTTGACCATGCAGCGTATTTTAATCGTTGAAGA
CGAACAAAAAACAGGTCGTT

Product: Copper resistance protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNDLIMIVIRFLLYLDLMVIFGLPFFQIYGISGVRHETYNLTNFRSFITFAVVTGIILTGINMLLVSNAMSGVTDLRELS
IHVIEMVIEETDVGISWIVRLCALFTTLGALFLYTNKRVLSCLLMTMSGGVALATLAWGGHAVMHDGLHYYLHLLSDLTH
LGAAGAWTGALVAFAILLMRRNEHNAQSVIVISDSLAKFATAGTVIVVALILSALVNYLYIAEGNLTPLFNSSWGRILLA
KTALFVLMLLLAAANRFHLGPRLEVMVREGNYDRSVALMRNSILTEFVVAIIILGAVAWLGMLAPSQVS

Sequences:

>Translated_309_residues
MNDLIMIVIRFLLYLDLMVIFGLPFFQIYGISGVRHETYNLTNFRSFITFAVVTGIILTGINMLLVSNAMSGVTDLRELS
IHVIEMVIEETDVGISWIVRLCALFTTLGALFLYTNKRVLSCLLMTMSGGVALATLAWGGHAVMHDGLHYYLHLLSDLTH
LGAAGAWTGALVAFAILLMRRNEHNAQSVIVISDSLAKFATAGTVIVVALILSALVNYLYIAEGNLTPLFNSSWGRILLA
KTALFVLMLLLAAANRFHLGPRLEVMVREGNYDRSVALMRNSILTEFVVAIIILGAVAWLGMLAPSQVS
>Mature_309_residues
MNDLIMIVIRFLLYLDLMVIFGLPFFQIYGISGVRHETYNLTNFRSFITFAVVTGIILTGINMLLVSNAMSGVTDLRELS
IHVIEMVIEETDVGISWIVRLCALFTTLGALFLYTNKRVLSCLLMTMSGGVALATLAWGGHAVMHDGLHYYLHLLSDLTH
LGAAGAWTGALVAFAILLMRRNEHNAQSVIVISDSLAKFATAGTVIVVALILSALVNYLYIAEGNLTPLFNSSWGRILLA
KTALFVLMLLLAAANRFHLGPRLEVMVREGNYDRSVALMRNSILTEFVVAIIILGAVAWLGMLAPSQVS

Specific function: Required for the copper-inducible expression of copper resistance

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family

Homologues:

Organism=Escherichia coli, GI1788145, Length=306, Percent_Identity=26.4705882352941, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCOD_ECOLX (Q47455)

Other databases:

- EMBL:   X83541
- PIR:   S70163
- InterPro:   IPR008457

Pfam domain/function: PF05425 CopD

EC number: NA

Molecular weight: Translated: 33849; Mature: 33849

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1dabaf38)-; HASH(0x1d8de69c)-; HASH(0x1d1c3d00)-; HASH(0x1d230fc0)-; HASH(0x1d2c3ea8)-; HASH(0x1cf96f14)-; HASH(0x1d75dcf0)-; HASH(0x1d26f71c)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLIMIVIRFLLYLDLMVIFGLPFFQIYGISGVRHETYNLTNFRSFITFAVVTGIILTG
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
INMLLVSNAMSGVTDLRELSIHVIEMVIEETDVGISWIVRLCALFTTLGALFLYTNKRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
SCLLMTMSGGVALATLAWGGHAVMHDGLHYYLHLLSDLTHLGAAGAWTGALVAFAILLMR
HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RNEHNAQSVIVISDSLAKFATAGTVIVVALILSALVNYLYIAEGNLTPLFNSSWGRILLA
CCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
KTALFVLMLLLAAANRFHLGPRLEVMVREGNYDRSVALMRNSILTEFVVAIIILGAVAWL
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLAPSQVS
HHCCCCCCH
>Mature Secondary Structure
MNDLIMIVIRFLLYLDLMVIFGLPFFQIYGISGVRHETYNLTNFRSFITFAVVTGIILTG
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
INMLLVSNAMSGVTDLRELSIHVIEMVIEETDVGISWIVRLCALFTTLGALFLYTNKRVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
SCLLMTMSGGVALATLAWGGHAVMHDGLHYYLHLLSDLTHLGAAGAWTGALVAFAILLMR
HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RNEHNAQSVIVISDSLAKFATAGTVIVVALILSALVNYLYIAEGNLTPLFNSSWGRILLA
CCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
KTALFVLMLLLAAANRFHLGPRLEVMVREGNYDRSVALMRNSILTEFVVAIIILGAVAWL
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLAPSQVS
HHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8594334