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The map label for this gene is yhaM

Identifier: 218696816

GI number: 218696816

Start: 3608917

End: 3610227

Strand: Reverse

Name: yhaM

Synonym: EC55989_3526

Alternate gene names: 218696816

Gene position: 3610227-3608917 (Counterclockwise)

Preceding gene: 218696817

Following gene: 218696813

Centisome position: 70.04

GC content: 56.52

Gene sequence:

>1311_bases
ATGTTTGATTCGACTTTAAATCCGTTATGGCAGCGTTACATCCTTGCAGTTCAGGAGGAAGTAAAACCGGCGCTGGGATG
TACTGAACCGATTTCACTGGCGCTGGCGGCGGCGGTTGCTGCGGCAGAACTGGAAGGTCCGGTTGAACGTGTAGAAGCCT
GGGTTTCGCCAAATCTGATGAAGAACGGTCTGGGCGTCACCGTTCCCGGCACGGGAATGGTGGGGCTGCCGATTGCGGCG
GCGCTGGGGGCGTTAGGTGGAAATGCCAACGCCGGGCTGGAAGTGCTGAAAGACGCAACTGCGCAGGCAATTGCCGATGC
CAAAGCACTGCTGGCGGCGGGGAAAGTCTCCGTTAAGATCCAGGAACCTTGCAATGAAATCCTCTTCTCACGCGCCAAAG
TCTGGCACGGTGAGAAGTGGGCGTGTGTCACCATCGTCGGCGGGCATACCAACATTGTGCATATTGAGACGCACAATGGT
GTGGTGTTTACCCAGCAGGCGTGTGTGGCAGAGGGCGAGCAAGAGTCTCCGCTGACGGTGCTTTCCAGAACGACGCTGGC
TGAGATCCTGAAGTTCGTCAATGAAGTCCCGTTTGCGGCGATCCGCTTTATTCTCGATTCCGCGAAGCTAAATTGTGCGT
TATCGCAGGAAGGTTTGAGCGGTAAGTGGGGGCTGCATATTGGCGCGACGCTGGAAAAACAGTGCGAGCGCGGTTTGCTG
GCGAAAGATCTCTCTTCATCCATTGTGATTCGTACCAGCGCGGCATCCGATGCGCGTATGGGCGGCGCTACGCTTCCGGC
TATGAGTAACTCCGGCTCGGGTAACCAGGGGATCACCGCAACAATGCCTGTGGTGGTGGTAGCAGAACACTTCGGAGCGG
ATGATGAACGGCTGGCGCGTGCGCTGATGCTTTCTCATTTGAGCGCAATTTACATCCATAACCAGTTACCGCGTTTGTCT
GCACTTTGTGCCGCAACGACCGCAGCAATGGGGGCCGCCGCCGGGATGGCATGGCTGGTGGATGGGCGTTATGAAACCAT
CTCGATGGCGATCAGCAGTATGATCGGCGATGTCAGCGGCATGATTTGCGATGGTGCGTCGAACAGCTGCGCGATGAAGG
TTTCGACCAGTGCTTCGGCTGCGTGGAAAGCGGTGTTAATGGCGCTGGATGATACCGCCGTGACCGGCAATGAAGGGATC
GTGGCGCATGATGTTGAGCAGTCGATTGCCAACCTGTGTGCGTTAGCAAGCCATTCGATGCAGCAAACGGATCGGCAGAT
TATCGAGATTATGGCGAGCAAGGCCAGATAA

Upstream 100 bases:

>100_bases
AGGGATGTCTCTGTACCTGATTATCGTCACTGGTTTGTTGCTTTGTGTTTCTCCGTTCCTGGCATTTTCTTGATTAACCT
GAAATTTTAAGGTTTTTAAT

Downstream 100 bases:

>100_bases
ACGCCAGGTTTTGGGTATTGTGCCGGATAAGGCGTTTTCGCCGCATCCGGCAACTTGTCTTTACGCGGTAGCTTCATCCT
CGACTAAACGCGTTTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAA
ALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWHGEKWACVTIVGGHTNIVHIETHNG
VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL
AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLS
ALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGI
VAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR

Sequences:

>Translated_436_residues
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAA
ALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWHGEKWACVTIVGGHTNIVHIETHNG
VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL
AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLS
ALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGI
VAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>Mature_436_residues
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAA
ALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWHGEKWACVTIVGGHTNIVHIETHNG
VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL
AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLS
ALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGI
VAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=436, Percent_Identity=99.3119266055046, Blast_Score=876, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 45383; Mature: 45383

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKI
HCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
QEPCNEILFSRAKVWHGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTV
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCEEEECHHHHHCCCCCCCHHH
LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCCCEEECCHHHHHHHCCHH
AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLAR
HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHEEEEHHHCCCHHHHHH
ALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCC
MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSM
EEECCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHH
QQTDRQIIEIMASKAR
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHH
KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKI
HCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
QEPCNEILFSRAKVWHGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTV
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCEEEECHHHHHCCCCCCCHHH
LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCCCEEECCHHHHHHHCCHH
AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLAR
HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHEEEEHHHCCCHHHHHH
ALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCC
MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSM
EEECCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHH
QQTDRQIIEIMASKAR
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA