Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is exeJ [H]
Identifier: 218696667
GI number: 218696667
Start: 3453192
End: 3453791
Strand: Reverse
Name: exeJ [H]
Synonym: EC55989_3372
Alternate gene names: 218696667
Gene position: 3453791-3453192 (Counterclockwise)
Preceding gene: 218696668
Following gene: 218696666
Centisome position: 67.0
GC content: 58.0
Gene sequence:
>600_bases GTGAGAAGGACTCGCGCTGGTTTCACGTTACTGGAAATGTTGGTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGC GCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAGCGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAA CGATGAGTTTTCTGACCCACGATCTGACCCAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCG TTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGAATGCGTTTTGTGCGCGGCGGTGTGGTTAACCCGTTGAT GCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTACCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCGCTGA CCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAAAGTTGATTCCGGCCGATTCGCTCCGTTTGCAGTTCTACGACGGC ACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCGATCCCTGTGGCGGTACGCATGACCCTGCATTCGCCGCAATGGGG CGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCAATAA
Upstream 100 bases:
>100_bases CGCTGCTCCAGGCGGTGGATATTGAAGTCAGCCTTCACGAAGACTTTTCGTCGGTGATTCAGTCACGACGCGCCTGGTTT AGCGCCGTGGGAGGCCAACA
Downstream 100 bases:
>100_bases TCATGATCACCTCACCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCAGTTATGATGCTGGTAACC ATCACGCTTTCCGGGCGGAT
Product: conserved hypothetical protein; putative exported protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ
Sequences:
>Translated_199_residues MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ >Mature_199_residues MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP J family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010055 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 22192; Mature: 22192
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYR HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCHHHHHHHCCCCCEEEEEEE IHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQAIPVAVRMT EHHHHHHHHHHCHHCCCCCCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEE LHSPQWGEIERIWLLRGPQ ECCCCCCCEEEEEEEECCC >Mature Secondary Structure MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYR HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCHHHHHHHCCCCCEEEEEEE IHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQAIPVAVRMT EHHHHHHHHHHCHHCCCCCCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEE LHSPQWGEIERIWLLRGPQ ECCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]