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The map label for this gene is clpV1 [H]

Identifier: 218696633

GI number: 218696633

Start: 3420014

End: 3422680

Strand: Reverse

Name: clpV1 [H]

Synonym: EC55989_3334

Alternate gene names: 218696633

Gene position: 3422680-3420014 (Counterclockwise)

Preceding gene: 218696634

Following gene: 218696632

Centisome position: 66.4

GC content: 58.23

Gene sequence:

>2667_bases
GTGAATAACATGGAAAATTCGGCAGCCCTGTTACGTCGTCTTAATCATTACTGTGCCCGTGCACTGGAAGGCGCAGCCTC
CCTTTGCCAGACCCGGGCCCATGCGGAAATCACCCCGGAGCACTGGTTACTGAAACTGCTGGAGCAGGGGGAAGGAGACC
TTACCGTGCTGGGCAGGCGTTATGACTGGGATATGGACGCGATATGGCAGTCGCTGCTCGGCTGGCTGGATAACCAGCCC
CGTAGCGTACGCAGTCGCCCGCAGCTTGCGCAGTCCCTGAATGCTCTGCTGAAACAGGCCTGGATGGTGGCCTCATTACA
GGGAGAAGAACATATCCGCAGCGTGCATCTGCTGGGTGCCCTGACGGAAAATCCGCACCTGGTTCGCTGTGACGGGCTGT
GGCCTCTGCTGACACTGAGTCAGAGCCAGTTGCAGCGTCTGTCCCCGCTGCTGGATGCGCAGCCTGATGAGTGTCCGGAG
ACGTTACAGGATGCAGAGCCTGTGCTGCCTCAGGGAGACAGTGTGACCTTTATCGGGCGCCCTGTCGGTGCGGATACGGC
AGGTATACCGTCAGGTGACCTGCCGCCGGTGTTACAGGGTGCGCTGGATAAATTCACCCGGGACATCACGGCCAGCGCGA
GAGAGGGGAAAATTGACCCGGTATCGGGACGCGATACGGAAATCCGTCAGATGGTGGATATTCTCTCCCGCCGTCGCAAG
AATAACCCGATTCTGGTGGGGGACCCCGGTGTGGGGAAAACGGCTCTGGTGGAAGGGCTCGCCCTGCGTATTGTGGAAGG
TAACGTACCAGAATCTCTCAGACCCGTCACCCTGCGCACCCTTGACCTCGGCCTGCTGCAGGCCGGTGCCGGCGTGAAAG
GTGAATTTGAACAGCGTCTGAAAAACGTGATTGATGCCGTGCAGCTGTCACCGGCTCCTGTACTGCTGTTTATAGATGAA
GCCCATACCCTTATCGGTGCCGGTAATCAGGCCGGTGGCGCGGATGCGGCCAACCTGCTGAAGCCTGCGCTGGCGCGAGG
CGAACTGCGCACCATTGCTGCCACCACCTGGTCTGAGTACAAACAATACCTGGAACGTGACGCGGCTCTGGAGCGGCGTT
TTCAGATGGTCAAAGTGGACGAGCCGGATGATGAGACGGCCTGTCTGATGCTGCGCTCCCTGAAATCCCGTTATGCGGAA
CATCATAACGTGCATATCACCGATGAGGCAGTACGTGCTGCCGTCACACTCTCGCGCCGTTATCTGACAGAACGTCAGTT
ACCGGACAAGGCCGTTGACCTGCTTGATACTGCTGCTGCCCGTGTGCGGATGAGCCTCGACACGGTGCCGGAACAGCTGA
CCCGAATCCGTTCACAGCTCGCTTCCCTCGGTATGGAAAAACAGGCACTGCTGGAAGATATTGCCGTTGGTCATCAGAAT
CACGGCGAACGCCTGTCTGCCATTGAGCAGGAAGAGAACGTGCTGATGACAGCACGTGATGACCTGGAGCAGCAGTACGC
CCGTGAGTGCGAACTCACCGGTGAGTTACTTGAAAGCCGCAGCGATATTTCCCGCCAGAGTGAGACACATCACCTGCAGC
AGGCACTGCACGACATTCAGCAGAATCAGCCCCTGCTCAGTGTGGATGTTGACGTACGCACCGTTGCCGGTGTGGTCGCG
GACTGGACCGGAGTGCCGTTATCCTCACTGATGAAGGATGAACAGACGGAACTGCTGCATCTGGAAAAGGATATCGGCAG
ACGGGTGGTCGGACAGGACGTGGCACTGGAATCCATTGCACAGCGTCTGCGTGCGGCGAAAACGGGTCTGACATCCGGTA
ACGGCCCCCAGGAGGTGTTCCTGCTGGTCGGCCCCAGTGGTGTGGGAAAAACCGAAACGGCACTGGCGCTGGCAGATGTG
ATGTACGGCGGCGAAAAATCACTGATTACCATCAATCTGTCGGAATATCAGGAGCCCCATACGGTTTCCCAGCTTAAGGG
TTCACCGCCCGGGTACGTGGGATACGGTCAGGGGGGTATTCTGACGGAAGCTGTACGTAAGCGCCCTTACAGCGTGGTGC
TGCTGGATGAAGTGGAAAAGGCCCACCGGGATGTGCTGAATCTGTTCTACCAGGTGTTTGACCGGGGCTTTATGCGCGAC
GGTGAGGGGCGTGAAATTGACTTCCGTAATACGGTCATTCTGATGACCTCCAATCTGGGCAGTGACCTTCTGATGCAGCA
ACTGAGCGAAAAGCCGGAGACAACGGAATCGGAGCTGCATGAGCTTATCCGTCCACTGCTGCGCGACCACTTCCAGCCAG
CACTGCTTGCCCGTTTCCAGACCGTGATTTACCGTCCGCTGACACCGTCTGCTATGCGCACCATTGTGGAGATGAAGCTT
GCACAGGTCTGCGAACGCCTGCACTGCCATTATGGGCTGAGCACATCGGTTGATGAACGTGTGTACGATGCCCTGACATC
CGCCTGCCTGCTGCCGGATACGGGCGCCCGGAATGTGGAGAGTCTGCTGAACCAGCAACTGCTGCCGGTACTGAGCCGGC
AGTTGCTGAGCCATATGGCCGCGAAGCAGAAACCGCAGGCGCTGGCTCTGGCATGGAGTGACGAAGACGGTATGGTGATT
GAGCTGCGGCAGGAATGCGCGTTATGA

Upstream 100 bases:

>100_bases
GGCGGGTGCTGAAGAAAGAATTCTCAATCCTGAACACAGACCTGATGCGCCTGGGTTACGGCGAAGGGCGGTAGCGTGCC
TGACGGTCTCCTGACAGTGA

Downstream 100 bases:

>100_bases
CCGGCTATGGCAGAAATCAGGACGCTGGCGCAGGTAAAAATCAAAGGGAAGAAGGCTCATTGCGGTTACTGACGCCGGGA
GAGATTGCGCTGGCGAGGCT

Product: putative chaperone clpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 888; Mature: 888

Protein sequence:

>888_residues
MNNMENSAALLRRLNHYCARALEGAASLCQTRAHAEITPEHWLLKLLEQGEGDLTVLGRRYDWDMDAIWQSLLGWLDNQP
RSVRSRPQLAQSLNALLKQAWMVASLQGEEHIRSVHLLGALTENPHLVRCDGLWPLLTLSQSQLQRLSPLLDAQPDECPE
TLQDAEPVLPQGDSVTFIGRPVGADTAGIPSGDLPPVLQGALDKFTRDITASAREGKIDPVSGRDTEIRQMVDILSRRRK
NNPILVGDPGVGKTALVEGLALRIVEGNVPESLRPVTLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQLSPAPVLLFIDE
AHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYLERDAALERRFQMVKVDEPDDETACLMLRSLKSRYAE
HHNVHITDEAVRAAVTLSRRYLTERQLPDKAVDLLDTAAARVRMSLDTVPEQLTRIRSQLASLGMEKQALLEDIAVGHQN
HGERLSAIEQEENVLMTARDDLEQQYARECELTGELLESRSDISRQSETHHLQQALHDIQQNQPLLSVDVDVRTVAGVVA
DWTGVPLSSLMKDEQTELLHLEKDIGRRVVGQDVALESIAQRLRAAKTGLTSGNGPQEVFLLVGPSGVGKTETALALADV
MYGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRD
GEGREIDFRNTVILMTSNLGSDLLMQQLSEKPETTESELHELIRPLLRDHFQPALLARFQTVIYRPLTPSAMRTIVEMKL
AQVCERLHCHYGLSTSVDERVYDALTSACLLPDTGARNVESLLNQQLLPVLSRQLLSHMAAKQKPQALALAWSDEDGMVI
ELRQECAL

Sequences:

>Translated_888_residues
MNNMENSAALLRRLNHYCARALEGAASLCQTRAHAEITPEHWLLKLLEQGEGDLTVLGRRYDWDMDAIWQSLLGWLDNQP
RSVRSRPQLAQSLNALLKQAWMVASLQGEEHIRSVHLLGALTENPHLVRCDGLWPLLTLSQSQLQRLSPLLDAQPDECPE
TLQDAEPVLPQGDSVTFIGRPVGADTAGIPSGDLPPVLQGALDKFTRDITASAREGKIDPVSGRDTEIRQMVDILSRRRK
NNPILVGDPGVGKTALVEGLALRIVEGNVPESLRPVTLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQLSPAPVLLFIDE
AHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYLERDAALERRFQMVKVDEPDDETACLMLRSLKSRYAE
HHNVHITDEAVRAAVTLSRRYLTERQLPDKAVDLLDTAAARVRMSLDTVPEQLTRIRSQLASLGMEKQALLEDIAVGHQN
HGERLSAIEQEENVLMTARDDLEQQYARECELTGELLESRSDISRQSETHHLQQALHDIQQNQPLLSVDVDVRTVAGVVA
DWTGVPLSSLMKDEQTELLHLEKDIGRRVVGQDVALESIAQRLRAAKTGLTSGNGPQEVFLLVGPSGVGKTETALALADV
MYGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRD
GEGREIDFRNTVILMTSNLGSDLLMQQLSEKPETTESELHELIRPLLRDHFQPALLARFQTVIYRPLTPSAMRTIVEMKL
AQVCERLHCHYGLSTSVDERVYDALTSACLLPDTGARNVESLLNQQLLPVLSRQLLSHMAAKQKPQALALAWSDEDGMVI
ELRQECAL
>Mature_888_residues
MNNMENSAALLRRLNHYCARALEGAASLCQTRAHAEITPEHWLLKLLEQGEGDLTVLGRRYDWDMDAIWQSLLGWLDNQP
RSVRSRPQLAQSLNALLKQAWMVASLQGEEHIRSVHLLGALTENPHLVRCDGLWPLLTLSQSQLQRLSPLLDAQPDECPE
TLQDAEPVLPQGDSVTFIGRPVGADTAGIPSGDLPPVLQGALDKFTRDITASAREGKIDPVSGRDTEIRQMVDILSRRRK
NNPILVGDPGVGKTALVEGLALRIVEGNVPESLRPVTLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQLSPAPVLLFIDE
AHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYLERDAALERRFQMVKVDEPDDETACLMLRSLKSRYAE
HHNVHITDEAVRAAVTLSRRYLTERQLPDKAVDLLDTAAARVRMSLDTVPEQLTRIRSQLASLGMEKQALLEDIAVGHQN
HGERLSAIEQEENVLMTARDDLEQQYARECELTGELLESRSDISRQSETHHLQQALHDIQQNQPLLSVDVDVRTVAGVVA
DWTGVPLSSLMKDEQTELLHLEKDIGRRVVGQDVALESIAQRLRAAKTGLTSGNGPQEVFLLVGPSGVGKTETALALADV
MYGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRD
GEGREIDFRNTVILMTSNLGSDLLMQQLSEKPETTESELHELIRPLLRDHFQPALLARFQTVIYRPLTPSAMRTIVEMKL
AQVCERLHCHYGLSTSVDERVYDALTSACLLPDTGARNVESLLNQQLLPVLSRQLLSHMAAKQKPQALALAWSDEDGMVI
ELRQECAL

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=299, Percent_Identity=31.7725752508361, Blast_Score=158, Evalue=2e-38,
Organism=Escherichia coli, GI1788943, Length=683, Percent_Identity=43.6310395314788, Blast_Score=557, Evalue=1e-159,
Organism=Escherichia coli, GI1787109, Length=244, Percent_Identity=47.5409836065574, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=694, Percent_Identity=39.9135446685879, Blast_Score=462, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6323002, Length=911, Percent_Identity=33.589462129528, Blast_Score=442, Evalue=1e-124,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 98309; Mature: 98309

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNMENSAALLRRLNHYCARALEGAASLCQTRAHAEITPEHWLLKLLEQGEGDLTVLGRR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCC
YDWDMDAIWQSLLGWLDNQPRSVRSRPQLAQSLNALLKQAWMVASLQGEEHIRSVHLLGA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LTENPHLVRCDGLWPLLTLSQSQLQRLSPLLDAQPDECPETLQDAEPVLPQGDSVTFIGR
CCCCCCEEEECCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEEC
PVGADTAGIPSGDLPPVLQGALDKFTRDITASAREGKIDPVSGRDTEIRQMVDILSRRRK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
NNPILVGDPGVGKTALVEGLALRIVEGNVPESLRPVTLRTLDLGLLQAGAGVKGEFEQRL
CCCEEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
KNVIDAVQLSPAPVLLFIDEAHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEY
HHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KQYLERDAALERRFQMVKVDEPDDETACLMLRSLKSRYAEHHNVHITDEAVRAAVTLSRR
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
YLTERQLPDKAVDLLDTAAARVRMSLDTVPEQLTRIRSQLASLGMEKQALLEDIAVGHQN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
HGERLSAIEQEENVLMTARDDLEQQYARECELTGELLESRSDISRQSETHHLQQALHDIQ
CCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNQPLLSVDVDVRTVAGVVADWTGVPLSSLMKDEQTELLHLEKDIGRRVVGQDVALESIA
HCCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLRAAKTGLTSGNGPQEVFLLVGPSGVGKTETALALADVMYGGEKSLITINLSEYQEPH
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCC
TVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRD
HHHHHCCCCCCEECCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
GEGREIDFRNTVILMTSNLGSDLLMQQLSEKPETTESELHELIRPLLRDHFQPALLARFQ
CCCCEEECCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
TVIYRPLTPSAMRTIVEMKLAQVCERLHCHYGLSTSVDERVYDALTSACLLPDTGARNVE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH
SLLNQQLLPVLSRQLLSHMAAKQKPQALALAWSDEDGMVIELRQECAL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHCC
>Mature Secondary Structure
MNNMENSAALLRRLNHYCARALEGAASLCQTRAHAEITPEHWLLKLLEQGEGDLTVLGRR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCC
YDWDMDAIWQSLLGWLDNQPRSVRSRPQLAQSLNALLKQAWMVASLQGEEHIRSVHLLGA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LTENPHLVRCDGLWPLLTLSQSQLQRLSPLLDAQPDECPETLQDAEPVLPQGDSVTFIGR
CCCCCCEEEECCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEEC
PVGADTAGIPSGDLPPVLQGALDKFTRDITASAREGKIDPVSGRDTEIRQMVDILSRRRK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
NNPILVGDPGVGKTALVEGLALRIVEGNVPESLRPVTLRTLDLGLLQAGAGVKGEFEQRL
CCCEEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
KNVIDAVQLSPAPVLLFIDEAHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEY
HHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KQYLERDAALERRFQMVKVDEPDDETACLMLRSLKSRYAEHHNVHITDEAVRAAVTLSRR
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
YLTERQLPDKAVDLLDTAAARVRMSLDTVPEQLTRIRSQLASLGMEKQALLEDIAVGHQN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
HGERLSAIEQEENVLMTARDDLEQQYARECELTGELLESRSDISRQSETHHLQQALHDIQ
CCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNQPLLSVDVDVRTVAGVVADWTGVPLSSLMKDEQTELLHLEKDIGRRVVGQDVALESIA
HCCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLRAAKTGLTSGNGPQEVFLLVGPSGVGKTETALALADVMYGGEKSLITINLSEYQEPH
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCC
TVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRD
HHHHHCCCCCCEECCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
GEGREIDFRNTVILMTSNLGSDLLMQQLSEKPETTESELHELIRPLLRDHFQPALLARFQ
CCCCEEECCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
TVIYRPLTPSAMRTIVEMKLAQVCERLHCHYGLSTSVDERVYDALTSACLLPDTGARNVE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH
SLLNQQLLPVLSRQLLSHMAAKQKPQALALAWSDEDGMVIELRQECAL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]