Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218696632
Identifier: 218696632
GI number: 218696632
Start: 3419451
End: 3420026
Strand: Reverse
Name: 218696632
Synonym: EC55989_3333
Alternate gene names: NA
Gene position: 3420026-3419451 (Counterclockwise)
Preceding gene: 218696633
Following gene: 218696631
Centisome position: 66.35
GC content: 48.26
Gene sequence:
>576_bases ATGCGCGTTATGACCGGCTATGGCAGAAATCAGGACGCTGGCGCAGGTAAAAATCAAAGGGAAGAAGGCTCATTGCGGTT ACTGACGCCGGGAGAGATTGCGCTGGCGAGGCTGGTATTCAGGTTGACAATCCCTTATGAAAAGGTCTGGATCCACCATG ACAGTTTTCTGCCTTTTGGTCTTCAGAATAAGCAAACTGCCATGCCCCCCGATGGTAAGATTTATTTCCGTGAGCACTAT CGGGATGATTATTCACTCAGCGTTCCCTTTTATCAGCATATGTTTATTCATGAAATGGCGCATGTCTGGCAGCGTGAAAA GGGAATGAATGTCATCGGTCGGGGGATGTTCAGTTGGGCGGTGAATTACCGTTATGTTCTGGACGGGCGTCTGTTAAGCG AATATCCCATGGAGCAGCAGGCACAAATTATTGCTGATCATTTTACTTTGCAGGCTGAAGGATACGGGACATGGTGTGAT ATGAGAAGGGACGGTGATATCACACTGGACGGAAATATGTCTGAGTATGTTATTCGCAGCCTGTATACCAGCACGTTGCG GGGGTTCCCATGGTAA
Upstream 100 bases:
>100_bases GCCGGCAGTTGCTGAGCCATATGGCCGCGAAGCAGAAACCGCAGGCGCTGGCTCTGGCATGGAGTGACGAAGACGGTATG GTGATTGAGCTGCGGCAGGA
Downstream 100 bases:
>100_bases AAATAAGAGCCTTTCGTTATCGTTCTGCTTTACTGCTCTGTCTGACGTTACTGACAGGATGCCCCGGACGCGGGGATTAT TATCGGTTTGATGAAACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc Protease; Rhs Element Vgr Related Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRVMTGYGRNQDAGAGKNQREEGSLRLLTPGEIALARLVFRLTIPYEKVWIHHDSFLPFGLQNKQTAMPPDGKIYFREHY RDDYSLSVPFYQHMFIHEMAHVWQREKGMNVIGRGMFSWAVNYRYVLDGRLLSEYPMEQQAQIIADHFTLQAEGYGTWCD MRRDGDITLDGNMSEYVIRSLYTSTLRGFPW
Sequences:
>Translated_191_residues MRVMTGYGRNQDAGAGKNQREEGSLRLLTPGEIALARLVFRLTIPYEKVWIHHDSFLPFGLQNKQTAMPPDGKIYFREHY RDDYSLSVPFYQHMFIHEMAHVWQREKGMNVIGRGMFSWAVNYRYVLDGRLLSEYPMEQQAQIIADHFTLQAEGYGTWCD MRRDGDITLDGNMSEYVIRSLYTSTLRGFPW >Mature_191_residues MRVMTGYGRNQDAGAGKNQREEGSLRLLTPGEIALARLVFRLTIPYEKVWIHHDSFLPFGLQNKQTAMPPDGKIYFREHY RDDYSLSVPFYQHMFIHEMAHVWQREKGMNVIGRGMFSWAVNYRYVLDGRLLSEYPMEQQAQIIADHFTLQAEGYGTWCD MRRDGDITLDGNMSEYVIRSLYTSTLRGFPW
Specific function: Unknown
COG id: COG4253
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22385; Mature: 22385
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVMTGYGRNQDAGAGKNQREEGSLRLLTPGEIALARLVFRLTIPYEKVWIHHDSFLPFG CCEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHEEEEECCCCCCCC LQNKQTAMPPDGKIYFREHYRDDYSLSVPFYQHMFIHEMAHVWQREKGMNVIGRGMFSWA CCCCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH VNYRYVLDGRLLSEYPMEQQAQIIADHFTLQAEGYGTWCDMRRDGDITLDGNMSEYVIRS EEEEEEECCEEHHHCCCHHHHHHHHHHEEEEECCCCCEECCCCCCCEEECCCHHHHHHHH LYTSTLRGFPW HHHHHHCCCCC >Mature Secondary Structure MRVMTGYGRNQDAGAGKNQREEGSLRLLTPGEIALARLVFRLTIPYEKVWIHHDSFLPFG CCEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHEEEEECCCCCCCC LQNKQTAMPPDGKIYFREHYRDDYSLSVPFYQHMFIHEMAHVWQREKGMNVIGRGMFSWA CCCCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHH VNYRYVLDGRLLSEYPMEQQAQIIADHFTLQAEGYGTWCDMRRDGDITLDGNMSEYVIRS EEEEEEECCEEHHHCCCHHHHHHHHHHEEEEECCCCCEECCCCCCCEEECCCHHHHHHHH LYTSTLRGFPW HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA