Definition Escherichia coli 55989, complete genome.
Accession NC_011748
Length 5,154,862

Click here to switch to the map view.

The map label for this gene is 218696630

Identifier: 218696630

GI number: 218696630

Start: 3414724

End: 3416406

Strand: Reverse

Name: 218696630

Synonym: EC55989_3330

Alternate gene names: NA

Gene position: 3416406-3414724 (Counterclockwise)

Preceding gene: 218696631

Following gene: 218696629

Centisome position: 66.28

GC content: 42.66

Gene sequence:

>1683_bases
ATGACAAAATATCAGGGATATGACGTAACAGATGCCACCCATAAAACCAGTATTCATAATGACTGGAAAGTTGTTGTTGC
AAAGAAAAAACCGGCGCGGGGTGTGACTTTAACTATTGGCATATTTTTCGATGGTACCGGAAACAATCGGGAGAATACAG
CATCTCGCCTGATGAAATTTAATGAGTGTAGTGCAGCCAGACAGGGGGTAAATCAAAAAGATGCACAAAGCTGTGAGGAC
TTTCTTAAAGAAATTAACAAGAACAGTATCTCGAATGGCAGTTATCGTGGATATTATTCCAATATTCACTGGCTTAATAT
ACTCTATCATCCAGATCAGGTACTTAAAAAAGACCAGACGTCAGCTCAAATTAAGACTTACATTTCCGGGATAGGGACTG
CGGCTGGTGAAGCAGATTCAGTCATAGGCATGGGATTAGGCACCAGTATTCTGGATATATTTGAAGGTGTGGTGACGAAA
ACCGACGAGGCAATGGAACGAATCACCCAGGCGTTATCAGAATTTATGGGGTTCAATTTAAGTCCTGATTTTTGTATCGC
AAAAATCCAGTTTGATGTTTTTGGTTTTAGCCGGGGAGCAGCGGCGGCAAGGCACTTTGCCAATCGGGTTATGGAACAGG
ATCCTGCTATAGCCAGAGCTATTGCTAAAGGGCTCAGAGGCGATTTTTATGATGGTAAACCTTCTGGTGAAGTACGTTTT
CTGGGGCTTTTTGATACTGTCGCAGCTATTGGTGGAATCAGTAATTTCTTCGATATTAATGGACGTAGCAACCCGGGAGT
AAAGCTGGAGTTGCGTCCTTCAGTCGCGAAGAAAGTTTTCCAGATTACTGCAATGAATGAATACCGATATAATTTCAGCC
TGAACAGTATTAAAGGTATGTGGCCCGAACTGGCTTTACCGGGGGCGCATTCAGATATTGGAGGTGGTTACAATCCGGTA
GGTTCACCTCTGCAGGAAAATGAAAGTCTGTTTCTGAGTTGCCCGGAATTTGAAATTGTCAGTGACGATACCAGAGAAAT
GGATACGCGAGTATACCGTAAAGCAGAGCAAGTCAGAAAAATGTTGATGACTCTGCCAGCCTTAAAACATATTTTGCCTC
ATGGAAAACTAACCACCAAAATTCGTTCCATAGGTGTGAACAACAGCAATCAACGTCGGGCTGGTGTGATACAAAAGCAG
GTGGGAGCCGCAGTATTTTTTGAGCGTATGGCAGTACCTAATGACTGGGCTAATGTTTGCCTGCGTGTGATGCTGGATGC
TGCTCAGGAAGCAGGGGTATTGTTTGAACCAATTCGACAAACAAATACTGAGTTACAACTTCCATCTGAACTAATATTTC
TTGCTGACAAAGCCATTGCTCAGGGAAAAGCGGTACGTTTGGGGCAAGAGCCTCAGGCTTTTACTGAGGAAGAGTTGTAT
ATTATCGGAAAATACACCCATTGTTCCGCTAACTGGAATATTGAGTCTGATGGTAATTTATGGGTGGATCCTACAACGGG
AGAGATTTTTATCCATCGCTTTGGTCCTAAAGGTAATAAGGCGTTCGTTTTTCCGAATAAACCAAATGATCGCTGGATTC
GTTCTGTATGGTACATGGATGATCAGCAGCGATTGAATGATAACGCAGTAAAAAATACTAAAGTTATGATGTCTGGTGTT
TAA

Upstream 100 bases:

>100_bases
GGATCACCGATGAAAATGGTAAAACAGCGCCAGTCAACACCTCCATTCCGTCAGTAGTAAAAGTTGAGTTTGGGAAGGTA
AAAATTCATGGAGAAACAGA

Downstream 100 bases:

>100_bases
CGCTACAGGATGACAATACATGACCAGAGATAAAATCATTTTTATCGCACCATTATTGGCATTGTTAACTGGGTGTAATT
CGGTTAGCTCACGGTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MTKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKFNECSAARQGVNQKDAQSCED
FLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQTSAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTK
TDEAMERITQALSEFMGFNLSPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF
LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGMWPELALPGAHSDIGGGYNPV
GSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRKMLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQ
VGAAVFFERMAVPNDWANVCLRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY
IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMDDQQRLNDNAVKNTKVMMSGV

Sequences:

>Translated_560_residues
MTKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKFNECSAARQGVNQKDAQSCED
FLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQTSAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTK
TDEAMERITQALSEFMGFNLSPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF
LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGMWPELALPGAHSDIGGGYNPV
GSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRKMLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQ
VGAAVFFERMAVPNDWANVCLRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY
IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMDDQQRLNDNAVKNTKVMMSGV
>Mature_559_residues
TKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKFNECSAARQGVNQKDAQSCEDF
LKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQTSAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTKT
DEAMERITQALSEFMGFNLSPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRFL
GLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGMWPELALPGAHSDIGGGYNPVG
SPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRKMLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQV
GAAVFFERMAVPNDWANVCLRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELYI
IGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMDDQQRLNDNAVKNTKVMMSGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62349; Mature: 62217

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKF
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHH
NECSAARQGVNQKDAQSCEDFLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQT
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEEEECCHHHHHCCCH
SAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTKTDEAMERITQALSEFMGFNL
HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
SPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEE
LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGM
EEHHHHHHHHCCCCCEEECCCCCCCCEEEEECHHHHHHHHHEEEEEEEEEEEEECCCCCC
WPELALPGAHSDIGGGYNPVGSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHH
MLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQVGAAVFFERMAVPNDWANVC
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY
HHHHHHHHHHCCCCHHHHHHCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEE
IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMD
EEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCC
DQQRLNDNAVKNTKVMMSGV
CHHHCCCCHHCCCEEEEECC
>Mature Secondary Structure 
TKYQGYDVTDATHKTSIHNDWKVVVAKKKPARGVTLTIGIFFDGTGNNRENTASRLMKF
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHH
NECSAARQGVNQKDAQSCEDFLKEINKNSISNGSYRGYYSNIHWLNILYHPDQVLKKDQT
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEEEECCHHHHHCCCH
SAQIKTYISGIGTAAGEADSVIGMGLGTSILDIFEGVVTKTDEAMERITQALSEFMGFNL
HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
SPDFCIAKIQFDVFGFSRGAAAARHFANRVMEQDPAIARAIAKGLRGDFYDGKPSGEVRF
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEE
LGLFDTVAAIGGISNFFDINGRSNPGVKLELRPSVAKKVFQITAMNEYRYNFSLNSIKGM
EEHHHHHHHHCCCCCEEECCCCCCCCEEEEECHHHHHHHHHEEEEEEEEEEEEECCCCCC
WPELALPGAHSDIGGGYNPVGSPLQENESLFLSCPEFEIVSDDTREMDTRVYRKAEQVRK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHH
MLMTLPALKHILPHGKLTTKIRSIGVNNSNQRRAGVIQKQVGAAVFFERMAVPNDWANVC
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRVMLDAAQEAGVLFEPIRQTNTELQLPSELIFLADKAIAQGKAVRLGQEPQAFTEEELY
HHHHHHHHHHCCCCHHHHHHCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEE
IIGKYTHCSANWNIESDGNLWVDPTTGEIFIHRFGPKGNKAFVFPNKPNDRWIRSVWYMD
EEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCC
DQQRLNDNAVKNTKVMMSGV
CHHHCCCCHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA