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The map label for this gene is yphA

Identifier: 218696170

GI number: 218696170

Start: 2896699

End: 2897121

Strand: Direct

Name: yphA

Synonym: EC55989_2829

Alternate gene names: 218696170

Gene position: 2896699-2897121 (Clockwise)

Preceding gene: 218696169

Following gene: 218696177

Centisome position: 56.19

GC content: 49.88

Gene sequence:

>423_bases
ATGAACACACTACGTTATTTTGATTTTGGAGCTGCCCGCCCCGTTTTGTTATTAATTGCCCGTATCGCCGTGGTCTTAAT
TTTCATTATTTTTGGTTTTCCCAAAATGATGGGCTTTGACGGTACGGTCCAATATATGGCCTCGTTGGGCGCGCCAATGC
CGATGCTGGCAGCGATTATTGCGGTAGTTATGGAAGTGCCCGCCGCGATATTAATCGTGCTTGGCTTTTTCACCCGTCCG
CTGGCGGTGCTGTTTATTTTCTACACGCTGGGTACGGCGGTGATTGGTCACCATTACTGGTATATGACCGGCGATGCGGT
TGGGCCAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCATTCCTGCTGCTGGCAATTACCGGGCCGGGGG
CAATTTCTCTCGATCGGCGTTAG

Upstream 100 bases:

>100_bases
GTAACCAGGATAATTAGCGAATATCTCAATGCCTGGGGCGTGGCGAGGTGCAAGAGTGTGTATTACGTTTAAATCACATT
ATCTTGCAAAGGGATTGGTT

Downstream 100 bases:

>100_bases
GAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGA
AGTTGTTGATTCCCCTGGTG

Product: conserved hypothetical protein; putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRP
LAVLFIFYTLGTAVIGHHYWYMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR

Sequences:

>Translated_140_residues
MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRP
LAVLFIFYTLGTAVIGHHYWYMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR
>Mature_140_residues
MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRP
LAVLFIFYTLGTAVIGHHYWYMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=140, Percent_Identity=99.2857142857143, Blast_Score=271, Evalue=1e-74,
Organism=Escherichia coli, GI87082210, Length=127, Percent_Identity=42.5196850393701, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 15260; Mature: 15260

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAII
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
AVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWYMTGDAVGPNMINFWKNVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
AGAFLLLAITGPGAISLDRR
HHHHHHHEECCCCCEECCCC
>Mature Secondary Structure
MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAII
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
AVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWYMTGDAVGPNMINFWKNVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
AGAFLLLAITGPGAISLDRR
HHHHHHHEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]