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The map label for this gene is ypdI

Identifier: 218696018

GI number: 218696018

Start: 2727076

End: 2727351

Strand: Direct

Name: ypdI

Synonym: EC55989_2671

Alternate gene names: 218696018

Gene position: 2727076-2727351 (Clockwise)

Preceding gene: 218696012

Following gene: 218696021

Centisome position: 52.9

GC content: 38.41

Gene sequence:

>276_bases
ATGAAAGTAAACTTAATACTTTTCAGCTTATTTTTATTGGTCTCTATTATGGCATGCAATGTTTTTGCATTTTCCATTTC
TGGTGGTGTAAGTGAGAGGAGCTATAAAGAGACTGAAAAAACATCAGCGATGACGACCACACACTCTACAAAACTTCAGC
CATCACAGGCGATTTTGTTTAAGATGAGAGAAGATGCGCCACCATTAAACCTCACAGAAGAAATCACGCCTACTTATCCG
ACAAAGGCGAATTATCTTATTCATCCTGTGCGATAG

Upstream 100 bases:

>100_bases
AGATGTCATTTATTATATCGATGTAAATATTGATTAATTATATGTAAATACAGCCATAACATCGTAGGTTCTCAGTGAAC
CATTTTCAGGATAACTTTCT

Downstream 100 bases:

>100_bases
CGTCTGTCACATGGCAGGTGAACAATCATGTCTGATGCTGATGTGAACACCTGCCCAAATGAGCCATCCTGACCCACTAT
CGCCTGCCATACCCCACCAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYP
TKANYLIHPVR

Sequences:

>Translated_91_residues
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYP
TKANYLIHPVR
>Mature_91_residues
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYP
TKANYLIHPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367134, Length=91, Percent_Identity=94.5054945054945, Blast_Score=176, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10210; Mature: 10210

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILF
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHEEE
KMREDAPPLNLTEEITPTYPTKANYLIHPVR
EECCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKVNLILFSLFLLVSIMACNVFAFSISGGVSERSYKETEKTSAMTTTHSTKLQPSQAILF
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHEEE
KMREDAPPLNLTEEITPTYPTKANYLIHPVR
EECCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]