Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is insI
Identifier: 218695568
GI number: 218695568
Start: 2221472
End: 2222623
Strand: Reverse
Name: insI
Synonym: EC55989_2188
Alternate gene names: 218695568
Gene position: 2222623-2221472 (Counterclockwise)
Preceding gene: 218695570
Following gene: 218695567
Centisome position: 43.12
GC content: 45.83
Gene sequence:
>1152_bases ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGC GAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGC GGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATA GCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGGGGCAGACGCTATTACAAAGCTGT TGATGCTAATAACCGAGCCAACAGAATGGCGAAAAGGCCAAAACCGTGCTTACTGGATCAAAATTTACCATTGCGAAAGC TTGTTCTGGAAAAGCTGGAGATGAAATGGTCTCCAGAGCAAATATCAGGATGGTTAAGGCGAACAAAACCACGTCAAAAA ACGCTGCGAATATCACCTGAGACAATTTATAAAACGCTGTACTTTCGTAGCCGTGAAGCGCTACACCACCTGAATATACA GCATCTGCGACGGTCGCATAGCCTTCGCCATGGCAGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGA ACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGATTTAGTCTCA GGTACAAAAAACTCTCATATAGCCACACTTGTAGACCGAAAATCACGTTATACGATCATCCTTAGACTCAGGGGCAAAGA TTCTGTCTTAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACA GAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCT TGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAC TCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGA TAATTGAAAGGGGTGTTGCATTGACAGATTGA
Upstream 100 bases:
>100_bases CGCGTATTTTTCAGCGACTCCTGTGCAAAATACGCTGTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATG GGGTTGCGGAGGTTTTTTGA
Downstream 100 bases:
>100_bases ATCTACAGTTGCTTTTTTTAATATATCTCGCTCAAGGCGAGCTTCATTTAACGCCTTACGCAGTTGCAGAATTTCAGATT CCAGTTCAGCCACCGTGCGG
Product: IS30 transposase; KpLE2 phage-like element
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAI ATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVS GTKNSHIATLVDRKSRYTIILRLRGKDSVLVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSP WQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD
Sequences:
>Translated_383_residues MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAI ATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVS GTKNSHIATLVDRKSRYTIILRLRGKDSVLVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSP WQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD >Mature_383_residues MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAI ATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVS GTKNSHIATLVDRKSRYTIILRLRGKDSVLVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSP WQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1790736, Length=383, Percent_Identity=99.7389033942559, Blast_Score=785, Evalue=0.0, Organism=Escherichia coli, GI1787671, Length=383, Percent_Identity=99.7389033942559, Blast_Score=785, Evalue=0.0, Organism=Escherichia coli, GI1786450, Length=383, Percent_Identity=99.4778067885117, Blast_Score=784, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 44308; Mature: 44308
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLT CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHEE LSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRP HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCC KPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREA CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHHHHH LHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVS HHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHCCCCCCCCCCC GTKNSHIATLVDRKSRYTIILRLRGKDSVLVNQALTDKFLSLPSELRKSLTWDRGMELAR CCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHH HLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNN HHHHEEECCEEEEEECCCCHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RPRKTLKFKTPKEIIERGVALTD CCCCCEECCCHHHHHHCCCCCCC >Mature Secondary Structure MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLT CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHEE LSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRP HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCC KPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREA CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHHHHH LHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVS HHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHCCCCCCCCCCC GTKNSHIATLVDRKSRYTIILRLRGKDSVLVNQALTDKFLSLPSELRKSLTWDRGMELAR CCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHH HLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNN HHHHEEECCEEEEEECCCCHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RPRKTLKFKTPKEIIERGVALTD CCCCCEECCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]