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The map label for this gene is ynjF

Identifier: 218695316

GI number: 218695316

Start: 1989214

End: 1989834

Strand: Reverse

Name: ynjF

Synonym: EC55989_1926

Alternate gene names: 218695316

Gene position: 1989834-1989214 (Counterclockwise)

Preceding gene: 218695319

Following gene: 218695306

Centisome position: 38.6

GC content: 53.78

Gene sequence:

>621_bases
GTGCTAGACCGCCATCTTCATCCCCGGATTAAACCGTTGTTGCATCAGTGCGTGCGGGTTATTGATAAACCGGGCATTAC
GCCAGATGGTTTAACATTAGTGGGATTTGCCATCGGCGTGCTGGCACTGCCTTTTCTGGCGCTGGGCTGGTATCTGGCGG
CGCTTGTCGTCATTTTGTTGAACAGGCTGCTTGATGGTCTGGACGGTGCGCTGGCGCGGCGCAGAGGGCTTACCGACGCG
GGCGGCTTTCTTGATATTTCTCTCGATTTTCTTTTTTACGCGCTGGTACCTTTTGGGTTTATCCTCGCCGCACCGCAGCA
AAACGCCCTGGCAGGCGGCTGGCTGCTGTTTGCGTTTATCGGCACAGGCAGCAGTTTTCTCGCTTTTGCTGCGCTGGCGG
CGAAACATCAGATTGATAATCCCGGTTATGCGCATAAATCGTTTTATTATCTGGGCGGGTTAACCGAAGGCACAGAAACG
ATCTTACTGTTTGTGCTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGAT
GACGACCTTTACGCGGGTGTGGAGTGGGTATCTGACGCTGAAGTCGCACCAGCGTCAGTAA

Upstream 100 bases:

>100_bases
TCAATCATTTTCATAAATTACACACGGGCAGATAAGCGAAAAATGCCATAATATCCGCACTGTTGCTCAATCAGAAAGGC
TTTATATTTAAGGAGTGCCT

Downstream 100 bases:

>100_bases
TTGCAATGTTATTTGCTACTGTCCGGGCCGCGTTCACCGGTTGCTACCGGATTTTTTGGATCGCTGCTCCATTCGTACCA
GCCGCCGTCATACACGGAAA

Product: putative phosphatidyl transferase, inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLDRHLHPRIKPLLHQCVRVIDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRGLTDA
GGFLDISLDFLFYALVPFGFILAAPQQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
ILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSHQRQ

Sequences:

>Translated_206_residues
MLDRHLHPRIKPLLHQCVRVIDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRGLTDA
GGFLDISLDFLFYALVPFGFILAAPQQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
ILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSHQRQ
>Mature_206_residues
MLDRHLHPRIKPLLHQCVRVIDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRGLTDA
GGFLDISLDFLFYALVPFGFILAAPQQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
ILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSHQRQ

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=206, Percent_Identity=98.0582524271845, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22703; Mature: 22703

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRHLHPRIKPLLHQCVRVIDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLLDGLDGALARRRGLTDAGGFLDISLDFLFYALVPFGFILAAPQQNALAGGWLLFAFI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWI
HCCHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGALCWMTTFTRVWSGYLTLKSHQRQ
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLDRHLHPRIKPLLHQCVRVIDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRLLDGLDGALARRRGLTDAGGFLDISLDFLFYALVPFGFILAAPQQNALAGGWLLFAFI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWI
HCCHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGALCWMTTFTRVWSGYLTLKSHQRQ
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]