Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is yaeT
Identifier: 218693642
GI number: 218693642
Start: 197193
End: 199625
Strand: Direct
Name: yaeT
Synonym: EC55989_0171
Alternate gene names: 218693642
Gene position: 197193-199625 (Clockwise)
Preceding gene: 218693641
Following gene: 218693643
Centisome position: 3.83
GC content: 50.47
Gene sequence:
>2433_bases ATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGTTTAGCAGCGCCACCGTATACGGTGCTGAAGGGTTCGTAGTGAA AGATATTCATTTCGAAGGCCTTCAGCGTGTCGCCGTTGGTGCGGCCCTCCTCAGTATGCCGGTGCGCACAGGCGACACGG TTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGAT GGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGA TGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGCCGATATCG AGAAAGGTCTGGAAGACTTCTACTACAGCGTCGGTAAATATAGCGCCAGCGTAAAAGCTGTCGTGACCCCGCTGCCGCGC AACCGTGTTGACCTAAAACTGGTGTTCCAGGAAGGTGTGTCAGCTGAAATCCAGCAAATTAACATTGTTGGTAACCATGC TTTCACCACCGACGAACTGATCTCTCATTTCCAACTGCGTGACGAAGTGCCGTGGTGGAACGTGGTAGGCGATCGTAAAT ACCAGAAACAGAAACTGGCGGGCGACCTTGAAACCCTGCGCAGCTACTATCTGGATCGCGGTTATGCCCGTTTCAACATC GACTCTACCCAGGTCAGTCTGACGCCAGATAAAAAAGGTATTTACGTCACGGTGAACATTACCGAAGGCGATCAGTACAA GCTTTCTGGCGTTGAAGTGAGCGGCAACCTTGCCGGGCACTCCGCTGAAATTGAGCAGCTGACTAAGATCGAGCCGGGCG AGCTGTATAACGGCACCAAAGTGACCAAGATGGAAGATGACATCAAAAAGCTTCTCGGTCGCTATGGTTATGCCTATCCG CGCGTACAGTCGATGCCTGAAATTAACGATGCCGACAAAACCGTTAAATTACGCGTGAACGTTGATGCGGGTAACCGTTT CTACGTGCGTAAGATCCGTTTTGAAGGTAACGATACCTCGAAAGATGCCGTCCTGCGTCGCGAAATGCGTCAGATGGAAG GTGCATGGCTGGGAAGCGATCTGGTCGATCAGGGTAAGGAGCGTCTGAATCGTCTGGGCTTCTTTGAAACTGTCGATACC GATACCCAACGTGTTCCGGGTAGCCCGGACCAGGTAGATGTCGTCTACAAGGTAAAAGAGCGCAACACCGGTAGCTTCAA CTTTGGTATTGGTTACGGTACTGAAAGTGGCGTGAGCTTCCAGGCTGGTGTGCAGCAGGATAACTGGTTAGGTACAGGTT ATGCTGTTGGTATCAACGGGACCAAAAACGATTACCAGACCTATGCTGAACTGTCGGTAACCAACCCGTACTTCACTGTA GATGGTGTAAGCCTCGGTGGTCGTCTCTTCTATAATGACTTCCAGGCAGATGACGCCGACCTGTCCGACTATACCAACAA GAGTTATGGTACAGACGTGACGTTGGGCTTCCCGATCAACGAATATAACTCGCTGCGTGCAGGTCTGGGTTATGTACATA ACTCCCTGTCCAACATGCAGCCTCAGGTTGCGATGTGGCGTTATCTGTACTCTATGGGTGAACATCCGAGCACCTCTGAT CAGGATAATAGCTTCAAAACGGACGACTTCACGTTCAACTATGGTTGGACCTATAACAAGCTTGACCGTGGTTACTTCCC GACAGATGGTTCACGTGTCAACCTTACCGGTAAAGTGACCATTCCTGGATCGGATAACGAATACTACAAAGTGACGTTAG ACACGGCGACTTATGTGCCGATCGATGACGATCACAAATGGGTTGTTCTGGGGCGTACCCGCTGGGGTTATGGTGATGGT TTAGGCGGCAAAGAGATGCCGTTCTACGAGAACTTCTATGCCGGTGGTTCCAGCACCGTGCGTGGCTTCCAGTCCAATAC AATTGGTCCGAAAGCAGTTTACTTCCCGCATCAGGCCAGTAATTATGATCCGGACTATGATTACGAATGTGCGACTCAGG ACGGCGCGAAAGACCTGTGTAAATCGGATGATGCTGTAGGCGGTAACGCCATGGCGGTTGCCAGCCTCGAGTTCATCACC CCGACGCCGTTTATTAGCGATAAGTATGCTAACTCGGTTCGTACTTCCTTCTTCTGGGATATGGGTACCGTTTGGGATAC AAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCAT TACAATGGATGTCCCCATTGGGGCCGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAA CAGTTCCAGTTTAACATCGGTAAAACCTGGTAA
Upstream 100 bases:
>100_bases ATCGCATTGGCTCGATTCTGCTGGTGCTGTTAATGGGGCTTGCACTTTTCAATGATTTCTCTCGGTTATGAGAGTTAGTT AGGAAGAACGCATAATAACG
Downstream 100 bases:
>100_bases GTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGATCAATATAAGATCGCCGGGCCACGCAAAGA ACTGCACCCTCCGGTGCAAA
Product: outer membrane protein assembly factor YaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 810; Mature: 809
Protein sequence:
>810_residues MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRD GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP RVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDT DTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSD QDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDG LGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAE QFQFNIGKTW
Sequences:
>Translated_810_residues MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRD GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP RVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDT DTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSD QDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDG LGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAE QFQFNIGKTW >Mature_809_residues AMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDG DTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRN RVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNID STQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPR VQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTD TQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVD GVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQ DNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGL GGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITP TPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQ FQFNIGKTW
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family
Homologues:
Organism=Escherichia coli, GI1786374, Length=810, Percent_Identity=100, Blast_Score=1664, Evalue=0.0,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): YAET_ECO24 (A7ZHR7)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001461346.1 - ProteinModelPortal: A7ZHR7 - SMR: A7ZHR7 - STRING: A7ZHR7 - PRIDE: A7ZHR7 - EnsemblBacteria: EBESCT00000022745 - GeneID: 5586085 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_0181 - eggNOG: COG4775 - GeneTree: EBGT00050000010848 - HOGENOM: HBG482361 - OMA: NSKTRDE - ProtClustDB: PRK11067 - BioCyc: ECOL331111:ECE24377A_0181-MONOMER - HAMAP: MF_01430 - InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 - PANTHER: PTHR12815 - PIRSF: PIRSF006076 - TIGRFAMs: TIGR03303
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR
EC number: NA
Molecular weight: Translated: 90553; Mature: 90422
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS CCHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHHEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEE NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI EEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCE VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEC RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV CCCCCEEEEEECCCCCCCEEEECCCCCCEECCCEEEECCCCCCCCCEEEEEEECCCEEEE DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ ECCCCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT HHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCEECCCCCCCCCCCCCEEEEEEEEE IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV ECCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHC RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT CCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCEEEEEEEEEEC PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL CCCCCCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCHH GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW HHHHHHHHHHHHHCCCCCCCEEEEECCCCC >Mature Secondary Structure AMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS CHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHHEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEE NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI EEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCE VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEC RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV CCCCCEEEEEECCCCCCCEEEECCCCCCEECCCEEEECCCCCCCCCEEEEEEECCCEEEE DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ ECCCCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT HHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCEECCCCCCCCCCCCCEEEEEEEEE IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV ECCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHC RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT CCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCEEEEEEEEEEC PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL CCCCCCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCHH GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW HHHHHHHHHHHHHCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA