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The map label for this gene is 218692549

Identifier: 218692549

GI number: 218692549

Start: 4953962

End: 4954309

Strand: Direct

Name: 218692549

Synonym: ECED1_5009

Alternate gene names: NA

Gene position: 4953962-4954309 (Clockwise)

Preceding gene: 218692548

Following gene: 218692550

Centisome position: 95.09

GC content: 56.9

Gene sequence:

>348_bases
TTGATCCCATTACCATCAGGGACAAAGATCTGGCTGGTCGCTGGCATCACCGATATGAGAAACGGCTTCAACGGCCTGGC
GGCAAAGGTGCAGACGACGCTGAAAGACGATCCGATGTCAGGTCACGTTTTTATCTTCCGTGGGCGTAATGGCAGTCAGG
TAAAGCTCCTCTGGTCTACCGGCGATGGACTGTGTCTGCTGACCAAACGGCTGGAGCGCGGCCGCTTCGCCTGGCCGTCA
GCCCGGGATGGCAAAGTGTTCCTCACACCGGCACAGCTGGCGATGCTGCTGGAAGGTATCGACTGGCGGCAGCCTAAAAG
ACTGCTTACGTCCCTGACTATGTTGTAA

Upstream 100 bases:

>100_bases
TCAATATCAGCTGTGAAGTGACGTTCCGGCACGGATCACTCCGTCTGAATGGTGCCATCAGCGAAAATATCCTGAACCTG
CTGATACGGGAGCTCAAACG

Downstream 100 bases:

>100_bases
GCCTCTTTATCCTGGTCGACGCTGAATGAGCCTGGTAATATACCCGGTATGAGCAGCTCACTTCCTGACGATATCAATGC
ACTGAAACGTCTCCTTGCCG

Product: putative transposase ORF2, IS66 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPS
ARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML

Sequences:

>Translated_115_residues
MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPS
ARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
>Mature_115_residues
MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTGDGLCLLTKRLERGRFAWPS
ARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 12797; Mature: 12797

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWST
CCCCCCCCEEEEEECCHHHCCCCCHHHHHEEECCCCCCCCCCEEEEECCCCCEEEEEEEC
GDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
CCCEEEEEHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWST
CCCCCCCCEEEEEECCHHHCCCCCHHHHHEEECCCCCCCCCCEEEEECCCCCEEEEEEEC
GDGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML
CCCEEEEEHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]