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The map label for this gene is insC1 [C]

Identifier: 218692548

GI number: 218692548

Start: 4953561

End: 4953965

Strand: Direct

Name: insC1 [C]

Synonym: ECED1_5008

Alternate gene names: 218692548

Gene position: 4953561-4953965 (Clockwise)

Preceding gene: 218692547

Following gene: 218692549

Centisome position: 95.09

GC content: 49.38

Gene sequence:

>405_bases
ATGAAATCATTAACCGCAGTGCGTAAAAAAAGCCCTAATTATCCCGTTGAGTTCAAAATCAAAATGGTTGAACTCTCGCA
TCGACCAGAGATCTCCGTAGCGCAACTCGCTCGTGAGCATGGGATCAACGATAATTTGCTGTTCAAGTGGCGCCAGTACT
GGCGCGAAGGAAAACTACGTCCTCCTTCAACAACAGAAAACAACGTGCCTGAGCTGCTCCCGATAACACTTGATGCCGAA
GATGTTGTCCCTACAACCTCCCCCCGGTCACAACCTGTAGCTGCTGCGACACCTGAATCACTCAATATCAGCTGTGAAGT
GACGTTCCGGCACGGATCACTCCGTCTGAATGGTGCCATCAGCGAAAATATCCTGAACCTGCTGATACGGGAGCTCAAAC
GTTGA

Upstream 100 bases:

>100_bases
GCGACCCGTCCGCTTGAATGTAAGCGTCGTCTCAGCACCGTCTGGCAGATCCTGAAATTCCTGAAAGAATAGTGGACACC
AAATATGGTGGACGCTATCC

Downstream 100 bases:

>100_bases
TCCCATTACCATCAGGGACAAAGATCTGGCTGGTCGCTGGCATCACCGATATGAGAAACGGCTTCAACGGCCTGGCGGCA
AAGGTGCAGACGACGCTGAA

Product: putative transposase

Products: NA

Alternate protein names: IS Orf; IS Protein; IS66 Family Transposase OrfA; IS66 Transposase

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE
DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR

Sequences:

>Translated_134_residues
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE
DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR
>Mature_134_residues
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE
DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15225; Mature: 15225

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLR
CCCCCCHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PPSTTENNVPELLPITLDAEDVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAI
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCH
SENILNLLIRELKR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLR
CCCCCCHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PPSTTENNVPELLPITLDAEDVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAI
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCH
SENILNLLIRELKR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA