| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yjeM [H]
Identifier: 218692495
GI number: 218692495
Start: 4902132
End: 4903628
Strand: Direct
Name: yjeM [H]
Synonym: ECED1_4945
Alternate gene names: 218692495
Gene position: 4902132-4903628 (Clockwise)
Preceding gene: 218692494
Following gene: 218692499
Centisome position: 94.1
GC content: 46.89
Gene sequence:
>1497_bases GTGGGCGCGTTTTATACACGCGCTGAAATGAAGGATGGTTTCATGCCTCACTCGATAAAAAAGATGAGTCTGATAGGACT CATATTGATGATCTTTACTTCTGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTTCGATTC CCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAA GAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTC CTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTTCTCAACATTCCTCTACGGTAGCGACATGA CCCAGCACTGGCATATTGCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCAGTGGCATGGATGATTCTGGTCACC GTCGTTGCTTCAAAAGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGT ATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGA ACCCAGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTT GGTGGTCTGGTTGATAAAACGGAAAATCCAGAAAAGAACTTTGCCAAAGGTATTGTTTTTGCCGCTATTGTTATTTCAAT CGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCG GCAATATTACCTATGTGCTGATGAAGAGCCTCGGGGTGACGCTGGGTAACGCACTGCATTTGTCACCTGAAGCGTCATTG TCGCTGGGCGTATGGTTTGCGCGTATTACCGGACTTTCGATGTTCCTCGCTTATACCGGTGCGTTCTTTACACTTTGCTA TTCACCGCTGAAAGCCATCATCCAGGGGACGCCGAAAGCATTGTGGCCGGAACCGATGACGCGCCTGAATGCGATGGGGA TGCCGTCTATCGCCATGTGGATGCAGTGTGGGTTGGTTACTGTCTTCATCCTGCTGGTTTCGTTTGGTGGCGGTACCGCA TCGGCGTTCTTTAACAAGCTGACGCTGATGGCGAACGTGTCTATGACGCTTCCTTACCTGTTCCTCGCGCTGGCTTTCCC GTTCTTTAAAGCACGTCAGGATCTCGACAGACCATTTGTGATTTTCAAAACGCGTATGTCGGCAATGATTGCGACAGTGG TTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACA TTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACTAG
Upstream 100 bases:
>100_bases GCTAAATACCACAATTTAAGACTGGATATTTGATATCATCCAGGTATCAATTCTGTATTGGTTTTTACGCTGCCCGCTCA ATGTTGGGCAGTGCAGTTCA
Downstream 100 bases:
>100_bases AACTATTGCAGTCGCATGGCGAACAAACCTGAGTTAGCTCTCGACTGATCATATGAAATCCTGCAACTCATCGTCTCTCC GGCGATGAGTTGTCAGGAAG
Product: putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MGAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSSIPFYIFSALLFFIPFALMMAEMGAAYRK EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVT VVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASL SLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTA SAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST LWMIGGPVFFSLLAMAIY
Sequences:
>Translated_498_residues MGAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSSIPFYIFSALLFFIPFALMMAEMGAAYRK EEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVT VVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASL SLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTA SAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST LWMIGGPVFFSLLAMAIY >Mature_497_residues GAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSSIPFYIFSALLFFIPFALMMAEMGAAYRKE EGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVTV VASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVG GLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASLS LGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTAS AFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTL WMIGGPVFFSLLAMAIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082380, Length=484, Percent_Identity=98.7603305785124, Blast_Score=955, Evalue=0.0, Organism=Escherichia coli, GI87081798, Length=463, Percent_Identity=22.4622030237581, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI48994921, Length=454, Percent_Identity=24.6696035242291, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787768, Length=471, Percent_Identity=23.7791932059448, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 54444; Mature: 54313
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSSIPFYIFSA CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHH LLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKV HHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEE WVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIA EEEHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV HHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHH MKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKA HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYL CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LWMIGGPVFFSLLAMAIY EEEECHHHHHHHHHHHHC >Mature Secondary Structure GAFYTRAEMKDGFMPHSIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSSIPFYIFSA CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHH LLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKV HHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCEE WVPFSTFLYGSDMTQHWHIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIA EEEHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAV HHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH GGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVL HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHH MKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKA HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYL CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDST HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LWMIGGPVFFSLLAMAIY EEEECHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]