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The map label for this gene is ybhI [C]

Identifier: 218692342

GI number: 218692342

Start: 4734705

End: 4736210

Strand: Direct

Name: ybhI [C]

Synonym: ECED1_4775

Alternate gene names: 218692342

Gene position: 4734705-4736210 (Clockwise)

Preceding gene: 218692341

Following gene: 218692345

Centisome position: 90.89

GC content: 51.13

Gene sequence:

>1506_bases
GTGAATATGTCATCAATATCCCATGGCGCACCACAAAAGCGTCGAATTATCCCTAATCCCGGCCTGTGGTTGGCGATCAT
TGCCGGAATTATTATTACCCTTCTGCCACTGGGCGATACCTTGCCCGTCGCTGGACAAAATATGATCGCCATTCTGGTGT
TTGCCATTATTGTCTGGATCAGCGAAGCGATGGATTACACCGCCAGTGCAATTGTTATTTCCGCACTGATTATCTTTATG
GTTGGTTTTGCCCCGGATATGAATCACCCGGACACGATCCTTGGCACCGCGAAAGCGCTGAAAATGACTCTGTCGGGTTT
TTCTAATTCTGCTCTGGCGCTGGTGGCAGCAGCAATGTTTATCGCGGCGGCAATGACCATTACCGGGCTGGATAAACGCA
TTGCGCTGTTTACTATGTCGAAGATAGGTGCCAGCAGCCGCAGCATTATTATCGGTGCCATTGTGGTGACCATCGTCCTG
AGCCTGGTTGTACCCAGTGCCACTGCCCGTACGGCTTGCGTGGTGCCGATTATGATGGGGGTCATTGCGGCATTTAAGGT
GGATAAACATTCACGTTTAGCGGCGTCAATGATGATTGTTATCGCCCAGGCGACCAGTATCTGGAACGTTGGTATTCAAA
CTTCGGCGGCGCAAAACCTGCTTTCTATCGGTTTTATCAATAAAACTTTCGGCGCCGGGCATTCTGTCAGCTGGCTTGAC
TGGCTGTTAGCGGGCGCGCCCTGGAGCCTCACCATGTCGGCGATCCTCTATTTCCTCGCACGTAAATTGTTGCCGCCAGA
AACGGAAGCTGTTGAAGGGGGGAGCGAGGCCATTAAAAAAGCACTTGCAGAGTTAGGGCCAACCACTGGTAAAGAAAAAC
GTTTGATCGGTATTTCGCTATTGTTACTGCTCTTTTGGTCTACTGGCGGAAAATTACACAGTATTGATACCACCTCTGTC
ACCCTTGCCGGACTGGCGATTATGTTGCTGCCAGGCATCGGTGTAATGAGCTGGAAAGAGGTCGAAAAACGTGTGCAGTG
GGGCACGTTGCTTATGTTTGGTATTGGTATCAGCCTGGGGTCCACGCTGCTTGATACGCAGGCAGCTTCATGGATGGCGA
ACTATGTGGTGAAAGGTTTTGGTCTCGATGGCTTGCCATCATTAGCCATCTTCGCGATTCTCGCCGCTTTCTTGATAATT
ATTCACCTGGGGTTTGCCAGTGCCACTGCGCTAACTGCCGCATTGCTGCCCATCCTGATTAGCCTGTTAAGCAGTCTGCC
GCCAGAACTCGGCGTTAACCCGGTCGGCATGACCATTCTGCTCGCCTTCAGTGTCAGTTTTGGCTTCATCCTGCCGATTA
ACGCGCCACAAAATATGGTGTGTATGGGTACGGATACCTTCACGCCACGCCAGTTTACCCGTGTGGGACTGTACCTGACG
GTGATCGGCTACCTGTTGTTGCTACTGTTTGCCGCCACCTGGTGGAAAATTTTAGGTCTAATGTGA

Upstream 100 bases:

>100_bases
AATAAATAATAAAATCATTAAATAACAAAGCGTTATTAAAAAATTAAAGATGGCATAGCTCCTGCAATAGCCAGGCAGGT
TTTTTATTTTTCACAATGAG

Downstream 100 bases:

>100_bases
GGAAACCAACGATGTCATTACAAATTGCTGTTGAAAAAGTGCGTTGGTTAGCTGCCGGGCTGCTGGAACTTAATGGCTGT
GATGCCGATATCGCTCAGGA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MNMSSISHGAPQKRRIIPNPGLWLAIIAGIIITLLPLGDTLPVAGQNMIAILVFAIIVWISEAMDYTASAIVISALIIFM
VGFAPDMNHPDTILGTAKALKMTLSGFSNSALALVAAAMFIAAAMTITGLDKRIALFTMSKIGASSRSIIIGAIVVTIVL
SLVVPSATARTACVVPIMMGVIAAFKVDKHSRLAASMMIVIAQATSIWNVGIQTSAAQNLLSIGFINKTFGAGHSVSWLD
WLLAGAPWSLTMSAILYFLARKLLPPETEAVEGGSEAIKKALAELGPTTGKEKRLIGISLLLLLFWSTGGKLHSIDTTSV
TLAGLAIMLLPGIGVMSWKEVEKRVQWGTLLMFGIGISLGSTLLDTQAASWMANYVVKGFGLDGLPSLAIFAILAAFLII
IHLGFASATALTAALLPILISLLSSLPPELGVNPVGMTILLAFSVSFGFILPINAPQNMVCMGTDTFTPRQFTRVGLYLT
VIGYLLLLLFAATWWKILGLM

Sequences:

>Translated_501_residues
MNMSSISHGAPQKRRIIPNPGLWLAIIAGIIITLLPLGDTLPVAGQNMIAILVFAIIVWISEAMDYTASAIVISALIIFM
VGFAPDMNHPDTILGTAKALKMTLSGFSNSALALVAAAMFIAAAMTITGLDKRIALFTMSKIGASSRSIIIGAIVVTIVL
SLVVPSATARTACVVPIMMGVIAAFKVDKHSRLAASMMIVIAQATSIWNVGIQTSAAQNLLSIGFINKTFGAGHSVSWLD
WLLAGAPWSLTMSAILYFLARKLLPPETEAVEGGSEAIKKALAELGPTTGKEKRLIGISLLLLLFWSTGGKLHSIDTTSV
TLAGLAIMLLPGIGVMSWKEVEKRVQWGTLLMFGIGISLGSTLLDTQAASWMANYVVKGFGLDGLPSLAIFAILAAFLII
IHLGFASATALTAALLPILISLLSSLPPELGVNPVGMTILLAFSVSFGFILPINAPQNMVCMGTDTFTPRQFTRVGLYLT
VIGYLLLLLFAATWWKILGLM
>Mature_501_residues
MNMSSISHGAPQKRRIIPNPGLWLAIIAGIIITLLPLGDTLPVAGQNMIAILVFAIIVWISEAMDYTASAIVISALIIFM
VGFAPDMNHPDTILGTAKALKMTLSGFSNSALALVAAAMFIAAAMTITGLDKRIALFTMSKIGASSRSIIIGAIVVTIVL
SLVVPSATARTACVVPIMMGVIAAFKVDKHSRLAASMMIVIAQATSIWNVGIQTSAAQNLLSIGFINKTFGAGHSVSWLD
WLLAGAPWSLTMSAILYFLARKLLPPETEAVEGGSEAIKKALAELGPTTGKEKRLIGISLLLLLFWSTGGKLHSIDTTSV
TLAGLAIMLLPGIGVMSWKEVEKRVQWGTLLMFGIGISLGSTLLDTQAASWMANYVVKGFGLDGLPSLAIFAILAAFLII
IHLGFASATALTAALLPILISLLSSLPPELGVNPVGMTILLAFSVSFGFILPINAPQNMVCMGTDTFTPRQFTRVGLYLT
VIGYLLLLLFAATWWKILGLM

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. SODIT1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI29171306, Length=461, Percent_Identity=22.7765726681128, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4506979, Length=547, Percent_Identity=22.3034734917733, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI301069349, Length=520, Percent_Identity=21.3461538461538, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI31795546, Length=290, Percent_Identity=22.7586206896552, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1786986, Length=411, Percent_Identity=30.9002433090024, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1786829, Length=481, Percent_Identity=27.4428274428274, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1789444, Length=423, Percent_Identity=28.6052009456265, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI32564681, Length=458, Percent_Identity=22.2707423580786, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71988385, Length=536, Percent_Identity=22.9477611940299, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32565804, Length=458, Percent_Identity=22.707423580786, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 52977; Mature: 52977

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8405966 [H]