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The map label for this gene is 218692185

Identifier: 218692185

GI number: 218692185

Start: 4543349

End: 4544743

Strand: Direct

Name: 218692185

Synonym: ECED1_4601

Alternate gene names: NA

Gene position: 4543349-4544743 (Clockwise)

Preceding gene: 218692184

Following gene: 218692190

Centisome position: 87.21

GC content: 45.02

Gene sequence:

>1395_bases
ATGAAAAAATCGACATTATCTTTAGCCATCGGTTTATTATTGGCATGTAGTACCGGTATGGCAAAAACACAGCATTTAAC
GCTGGAACAACGCATGGCATTGCTGGAAGAACGCCTGGAAGCGGCAGAAATGCGGGCAGCAAAAGCAGAGGGGCAGGTTA
AACAGCTTCAGACACAACAAGCCGCCGAGATCCGCGAAATTAAGACCGCACAGGGCAACACGCCGGTAAACGGTCAATCA
ACGACGGAGTCAGAGAAGAAAAACGCCACCCCGCCTAATCTCCTGCTTTCAGGGTATGGCGATTTAAAAATCTACGGTGA
CGTCGAATTTAATATGGATGCGGAAAGTAATCATGGCCTGCTGGCAATGACCAACGCTGATGTGAATAGCGATCCCACTA
ATGAACAGTGGAATCTCAATGGTCGTATTCTGTTAGGTTTTGATGGTATGCGAAAACTGGATAATGGCTATTTCGCTGGG
TTCTCCGCACAACCGCTGGGGGATATGCACGGTTCAGTAAATATCGATGATGCGGTTTTCTTCTTTGGCAAAGAAAACGA
CTGGAAGGTCAAAGTAGGCCGTTTTGAAGCTTACGATATGTTCCCGCTGAATCAGGATACCTTTGTTGAACATTCCGGTA
ATACTGCGAACGATCTTTATGACGATGGCAGCGGTTATATCTATATGATGAAAGAGGGCCGCGGGCGTTCTAACGCTGGC
GGTAATTTCCTCGTCAGCAAACAACTCGATAACTGGTATTTTGAATTAAACACGTTACTGGAAGACGGAACATCTTTATA
TAACGACGGTAATTATCATGGACGCGATATGGAACAGCAGAAAAATGTTGCTTATCTGCGTCCGGTAATTGCCTGGTCGC
CGACGGAAGAATTCACCGTTTCTGCAGCGATGGAAGCGAACGTGGTAAATAATGCTTATGGTTATACCGATAGCAAGGGT
AATTTTGTCGATCAGTCCGATCGTACCGGTTATGGCATGAGCATGACCTGGAATGGCCTGAAAACCGATCCGGAAAATGG
CATCGTGGTTAATCTTAATACCGCCTATTTAGATGCTAATAATGAAAAAGATTTCACCGCTGGAATTAACGCGCTGTGGA
AACGTTTCGAGCTGGGTTATATCTACGCACATAATAAGATTGATGAATTTAGTGGCGTGGTTTGTGATAACGATTGCTGG
ATTGATGATGAAGGAACATACAACATTCACACCATTCATGCGTCTTATCAGTTCGCTAATGTGATGGATATGGAGAACTT
TAATATTTACCTCGGGACGTATTACTCCATTCTGGATAGCGACGGCGATAAGATACACGGCGACGATAGTGATGACCGTT
ACGGCGCACGCGTTCGCTTTAAATACTTCTTCTGA

Upstream 100 bases:

>100_bases
AAGTTGGATTAAAAATTCGAAAGTGCACACCTTATATTTCTCTATATACGTATTCCTTTTGGAAAGCGTAGGGTCTCCTT
TATTTCAGGGAACGTAAATA

Downstream 100 bases:

>100_bases
TGAAAGGGCGGTGCTGGATATTTTCCGGCACCGCAACTCATTAAGGCAGATAAAACACTTCTTGCAGTTCGCTACTGACT
GGGCTGTTATCCGCATTAGC

Product: putative glycoporin

Products: NA

Alternate protein names: Glycoporin RafY; Glycoporin RfaY

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAEGQVKQLQTQQAAEIREIKTAQGNTPVNGQS
TTESEKKNATPPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAG
FSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKG
NFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCW
IDDEGTYNIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF

Sequences:

>Translated_464_residues
MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAEGQVKQLQTQQAAEIREIKTAQGNTPVNGQS
TTESEKKNATPPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAG
FSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKG
NFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCW
IDDEGTYNIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF
>Mature_464_residues
MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAEGQVKQLQTQQAAEIREIKTAQGNTPVNGQS
TTESEKKNATPPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAG
FSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKG
NFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCW
IDDEGTYNIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52040; Mature: 52040

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAEGQVKQLQTQQ
CCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AAEIREIKTAQGNTPVNGQSTTESEKKNATPPNLLLSGYGDLKIYGDVEFNMDAESNHGL
HHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCE
LAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAGFSAQPLGDMHGSVNIDDAVF
EEEECCCCCCCCCCCEECCCCEEEEECCCHHHHCCCEEECCCCCCCCCCCCCCEECCEEE
FFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
EEECCCCEEEEEEEEEEEEECCCCCCCEEECCCCCHHCCEECCCCEEEEEECCCCCCCCC
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTV
CCEEEEECCCCEEEEEHHHHHCCCHHCCCCCCCCCCHHHHCCEEEEEEEEEECCCHHEEE
SAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDAN
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECC
NEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDEGTYNIHTIHASYQFAN
CCCCHHHHHHHHHHHHEEEEEEECCCCHHHCCEEECCCCEECCCCCEEEEEEEECEEEEE
VMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF
EEECCCCEEEEEEEEEEECCCCCEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAEGQVKQLQTQQ
CCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AAEIREIKTAQGNTPVNGQSTTESEKKNATPPNLLLSGYGDLKIYGDVEFNMDAESNHGL
HHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCE
LAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAGFSAQPLGDMHGSVNIDDAVF
EEEECCCCCCCCCCCEECCCCEEEEECCCHHHHCCCEEECCCCCCCCCCCCCCEECCEEE
FFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
EEECCCCEEEEEEEEEEEEECCCCCCCEEECCCCCHHCCEECCCCEEEEEECCCCCCCCC
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTV
CCEEEEECCCCEEEEEHHHHHCCCHHCCCCCCCCCCHHHHCCEEEEEEEEEECCCHHEEE
SAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDAN
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECC
NEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDEGTYNIHTIHASYQFAN
CCCCHHHHHHHHHHHHEEEEEEECCCCHHHCCEEECCCCEECCCCCEEEEEEEECEEEEE
VMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF
EEECCCCEEEEEEEEEEECCCCCEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA