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The map label for this gene is yiaM [H]

Identifier: 218691867

GI number: 218691867

Start: 4186400

End: 4186867

Strand: Direct

Name: yiaM [H]

Synonym: ECED1_4266

Alternate gene names: 218691867

Gene position: 4186400-4186867 (Clockwise)

Preceding gene: 218691866

Following gene: 218691868

Centisome position: 80.36

GC content: 44.23

Gene sequence:

>468_bases
ATGAAACGGATACTCGAAGGCATTCTTGCGATCATCATCGCAATACTGTCTTGTATTATTTTTATTAATATCATTCTTCG
ATATGGATTCCACACAAGTATATTATCGATTGATGAATTATCCCGACTTTTATTTGTCTGGTTAACCTTTATTGGCGCAA
TCGTTGCTTATATGGACAACAGCCATGTGCAGGTTACTTTTTTAGTCGAAAAACTCTCACCGGCTAATCAACAACGTGTT
TCGCTGCTAACCCATACGCTCATTTTATTGCTGTGTCTGGGGCTGGCCTGGGGCGCTATAGAAAAAACAGCGCAAGACTG
GAGCAACTTATCGCCCATTCTTGGCGTCCCCATTGGCTTAATGTACGCCGCCGCTATCCCCACCAGTCTGATTATCGCAT
TGCTGGAATTGCGTCACTTATACCGGCAGTTCACAAATACCCCCAGCCGAAACCAACAAGGAGCCTGA

Upstream 100 bases:

>100_bases
TATATCACTTTGAATATCTAATTAGCCGTTTTCTGATAATTATTACGAATATTAACAACATTAGCGCATAAAAAATATTG
CATAACCAGAAGGACTCGTT

Downstream 100 bases:

>100_bases
CGATGACAATCCTTATATTTATTGTCAGTTTGTTAGGGGCTATCGCAATTGGCGTTCCCATCGCCTGGGCATTATTACTG
TGCGGCATTTCATTGATGTT

Product: 2,3-diketo-L-gulonate TRAP transporter small permease YiaM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKRILEGILAIIIAILSCIIFINIILRYGFHTSILSIDELSRLLFVWLTFIGAIVAYMDNSHVQVTFLVEKLSPANQQRV
SLLTHTLILLLCLGLAWGAIEKTAQDWSNLSPILGVPIGLMYAAAIPTSLIIALLELRHLYRQFTNTPSRNQQGA

Sequences:

>Translated_155_residues
MKRILEGILAIIIAILSCIIFINIILRYGFHTSILSIDELSRLLFVWLTFIGAIVAYMDNSHVQVTFLVEKLSPANQQRV
SLLTHTLILLLCLGLAWGAIEKTAQDWSNLSPILGVPIGLMYAAAIPTSLIIALLELRHLYRQFTNTPSRNQQGA
>Mature_155_residues
MKRILEGILAIIIAILSCIIFINIILRYGFHTSILSIDELSRLLFVWLTFIGAIVAYMDNSHVQVTFLVEKLSPANQQRV
SLLTHTLILLLCLGLAWGAIEKTAQDWSNLSPILGVPIGLMYAAAIPTSLIIALLELRHLYRQFTNTPSRNQQGA

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate [H]

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

Organism=Escherichia coli, GI1790002, Length=157, Percent_Identity=73.2484076433121, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 17284; Mature: 17284

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILEGILAIIIAILSCIIFINIILRYGFHTSILSIDELSRLLFVWLTFIGAIVAYMDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SHVQVTFLVEKLSPANQQRVSLLTHTLILLLCLGLAWGAIEKTAQDWSNLSPILGVPIGL
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MYAAAIPTSLIIALLELRHLYRQFTNTPSRNQQGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRILEGILAIIIAILSCIIFINIILRYGFHTSILSIDELSRLLFVWLTFIGAIVAYMDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SHVQVTFLVEKLSPANQQRVSLLTHTLILLLCLGLAWGAIEKTAQDWSNLSPILGVPIGL
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MYAAAIPTSLIIALLELRHLYRQFTNTPSRNQQGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]