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The map label for this gene is yhfW [H]

Identifier: 218691656

GI number: 218691656

Start: 3940800

End: 3942026

Strand: Reverse

Name: yhfW [H]

Synonym: ECED1_4038

Alternate gene names: 218691656

Gene position: 3942026-3940800 (Counterclockwise)

Preceding gene: 218691657

Following gene: 218691655

Centisome position: 75.67

GC content: 54.36

Gene sequence:

>1227_bases
ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGGGCAATGAAAGATGTCACGTTGGTGCGTCCGCAGGA
TGCCGGGGCGAATACCTGTGGTCACATCCTGAGCCAGTTGCCGCATTTGCAGCTACCAACGCTGGAGACGCTGGGGCTAA
TCAACGCATTGGGTTATGCGCCTGGCGATATGCAGCCGTCAGACTCCTCCACCTGGGGCGTGGCGGAACTGCAACATGAA
GGTGGCGATACCTTTATGGGGCATCAGGAGATTTTAGGTACGCGCCCATTACCGCCGCTGCGGATGCCCTTTCGTGATGT
GATTGACCGTGTTGAGCAGGCATTAGTATCCGCCGGTTGGCAGGTGGAGCGTCGTGGCGATGATCTGCAATTTCTGTGGG
TCAATCAGGCGGTTGCGATTGGCGATAATCTCGAGGCGGATTTAGGCCAGGTCTATAACATCACCGCCAATCTCTCTGTG
ATCTCTTTTGACGACGCAATCAAAATGGGTCGTATTGTGCGTGAGCAGGTACAGGTCGGTCGGGTCATTACATTTGGCGG
CCTGTTACCCGACAGTCAACGCATTCTCGATGCCGCAGAAAGCAAAGAAGGGCGCTTTATTGGCATCAATGCGCCGCGTT
CTGGCGCCTATGACAACGGTTTCCAGGTCGTACATATGGGCTACGGTGTTGATGAAAAAGTGCAGGTGCCGCAAAAACTG
TATGAAGCGGGCGTGCCAACCGTGCTGGTGGGTAAGGTGGCAGATATCGTCAGCAATCCTTATGGCGTGAGCTGGCAAAA
CCTGGTGGATAGCCAGCGGATTATGGATATCACCCTCAACGAATTTAACACCTATCCGACGGCGTTTATTTGTACCAATA
TCCAGGAAACCGACCTCGCTGGTCATGCAGAAGACGTCGCACGTTATGCCGAACGTTTGCAGGTCGTTGACCGTAACCTT
GCCCGGCTTGTTGAGGCGATGCAGCCAGATGATTGCCTGGTCGTGATGGCGGATCACGGTAACGATCCGACCATTGGTCA
CAGCCACCATACCCGCGAAGTGGTGCCAGTGCTGGTTTATCAGCAAGGACTGGTCGCTACGCAGCTCGGTGTGCGCACCA
CGCTTTCTGATGTGGGGGCTACAGTGTGTGAATTTTTCCGTGCGCCACCGCCACAAAATGGTCGCTCTTTTCTTTCCTCC
TTCCGGTTTGCAGGAGACACCCTATGA

Upstream 100 bases:

>100_bases
TATCACCCGTAGCGATGTGGTGCTGGTGTCCGGTATTCACCGTGGCGAACCAGAAATAGTTGGTCGTTATGACAGCCTCG
GCAACCCTCTGGAGGCGTAA

Downstream 100 bases:

>100_bases
GTTTTGATCCGACGGGCTACACCCTTGCCCATGAGCATCTGCATATTGATCTTTCCGGCTTTAAAAACAACGTGGACTGC
CGCCTTGATCAGTATGCGTT

Product: putative mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSSTWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSV
ISFDDAIKMGRIVREQVQVGRVITFGGLLPDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLNEFNTYPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNL
ARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSS
FRFAGDTL

Sequences:

>Translated_408_residues
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSSTWGVAELQHE
GGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSV
ISFDDAIKMGRIVREQVQVGRVITFGGLLPDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLNEFNTYPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNL
ARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSS
FRFAGDTL
>Mature_407_residues
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSSTWGVAELQHEG
GDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVI
SFDDAIKMGRIVREQVQVGRVITFGGLLPDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLY
EAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLNEFNTYPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLA
RLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSF
RFAGDTL

Specific function: Unknown

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1789781, Length=408, Percent_Identity=98.0392156862745, Blast_Score=824, Evalue=0.0,
Organism=Escherichia coli, GI1790843, Length=442, Percent_Identity=28.9592760180996, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: NA

Molecular weight: Translated: 44591; Mature: 44460

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYA
CCEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGDMQPSDSSTWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGW
CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
QVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKMGRIVREQVQVG
EEEECCCCEEEEEECCEEEECCCCCCCCCCEEEEEECEEEEECHHHHHHHHHHHHHHHHC
RVITFGGLLPDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
CEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLNEFNTYPTAFICTNIQETDLA
HHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCCCEEEEEHHHCCCCCCEEEECCCCHHCCC
GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
QQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSFRFAGDTL
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYA
CEEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PGDMQPSDSSTWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGW
CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
QVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKMGRIVREQVQVG
EEEECCCCEEEEEECCEEEECCCCCCCCCCEEEEEECEEEEECHHHHHHHHHHHHHHHHC
RVITFGGLLPDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
CEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLNEFNTYPTAFICTNIQETDLA
HHCCCCEEEHHHHHHHHCCCCCCCHHHHHCCCCEEEEEHHHCCCCCCEEEECCCCHHCCC
GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
QQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSFRFAGDTL
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]